Gene : MD09G1281300 M. domestica v1.1

Defline:  (1 of 1) PTHR31480//PTHR31480:SF2 - FAMILY NOT NAMED // PHYTOENE SYNTHASE, CHLOROPLASTIC Genomic Order:  2433
Name:  ? MD09G1281300 Secondary Identifier:  ? PAC:40105462

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mdomestica CAROTENOID-PWY Malus domestica pathologic  
Mdomestica PWY-6475 Malus domestica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MD09G1281300 0.5kb upstream 0.5kb upstream 4605 true Chr09: 35841522-35846126 Malus domestica
MD09G1281300 0.5kb upstream 0.5kb upstream 500 false Chr09: 35845627-35846126 Malus domestica
MD09G1281300 0.5kb downstream 0.5kb downstream 4605 true Chr09: 35841022-35845626 Malus domestica
MD09G1281300 0.5kb downstream 0.5kb downstream 500 false Chr09: 35841022-35841521 Malus domestica
MD09G1281300 1.0kb upstream 1.0kb upstream 5105 true Chr09: 35841522-35846626 Malus domestica
MD09G1281300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 35845627-35846626 Malus domestica
MD09G1281300 1.0kb downstream 1.0kb downstream 5105 true Chr09: 35840522-35845626 Malus domestica
MD09G1281300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 35840522-35841521 Malus domestica
MD09G1281300 2.0kb upstream 2.0kb upstream 6105 true Chr09: 35841522-35847626 Malus domestica
MD09G1281300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 35845627-35847626 Malus domestica
MD09G1281300 2.0kb downstream 2.0kb downstream 6105 true Chr09: 35839522-35845626 Malus domestica
MD09G1281300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 35839522-35841521 Malus domestica
MD09G1281300 5.0kb upstream 5.0kb upstream 9105 true Chr09: 35841522-35850626 Malus domestica
MD09G1281300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 35845627-35850626 Malus domestica
MD09G1281300 5.0kb downstream 5.0kb downstream 9105 true Chr09: 35836522-35845626 Malus domestica
MD09G1281300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 35836522-35841521 Malus domestica
MD09G1281300 10.0kb upstream 10.0kb upstream 14105 true Chr09: 35841522-35855626 Malus domestica
MD09G1281300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 35845627-35855626 Malus domestica
MD09G1281300 10.0kb downstream 10.0kb downstream 14105 true Chr09: 35831522-35845626 Malus domestica
MD09G1281300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 35831522-35841521 Malus domestica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122301582 5265 Fabidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain