Gene : MD06G1158600 M. domestica v1.1
Defline:  (1 of 14) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1316
Name:  ? MD06G1158600 Secondary Identifier:  ? PAC:40095810
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MD06G1158600 0.5kb upstream 0.5kb upstream 2292 true Chr06: 30036156-30038447 Malus domestica
MD06G1158600 0.5kb upstream 0.5kb upstream 500 false Chr06: 30036156-30036655 Malus domestica
MD06G1158600 0.5kb downstream 0.5kb downstream 2292 true Chr06: 30036656-30038947 Malus domestica
MD06G1158600 0.5kb downstream 0.5kb downstream 500 false Chr06: 30038448-30038947 Malus domestica
MD06G1158600 1.0kb upstream 1.0kb upstream 2792 true Chr06: 30035656-30038447 Malus domestica
MD06G1158600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30035656-30036655 Malus domestica
MD06G1158600 1.0kb downstream 1.0kb downstream 2792 true Chr06: 30036656-30039447 Malus domestica
MD06G1158600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30038448-30039447 Malus domestica
MD06G1158600 2.0kb upstream 2.0kb upstream 3792 true Chr06: 30034656-30038447 Malus domestica
MD06G1158600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30034656-30036655 Malus domestica
MD06G1158600 2.0kb downstream 2.0kb downstream 3792 true Chr06: 30036656-30040447 Malus domestica
MD06G1158600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30038448-30040447 Malus domestica
MD06G1158600 5.0kb upstream 5.0kb upstream 6792 true Chr06: 30031656-30038447 Malus domestica
MD06G1158600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30031656-30036655 Malus domestica
MD06G1158600 5.0kb downstream 5.0kb downstream 6792 true Chr06: 30036656-30043447 Malus domestica
MD06G1158600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30038448-30043447 Malus domestica
MD06G1158600 10.0kb upstream 10.0kb upstream 11792 true Chr06: 30026656-30038447 Malus domestica
MD06G1158600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30026656-30036655 Malus domestica
MD06G1158600 10.0kb downstream 10.0kb downstream 11792 true Chr06: 30036656-30048447 Malus domestica
MD06G1158600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30038448-30048447 Malus domestica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310699 5265 Fabidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

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