Gene : MD04G1248300 M. domestica v1.1

Defline:  (1 of 5) PTHR11685:SF154 - E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED Genomic Order:  2091
Name:  ? MD04G1248300 Secondary Identifier:  ? PAC:40119387

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mdomestica PWY-7511 Malus domestica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MD04G1248300 0.5kb upstream 0.5kb upstream 8180 true Chr04: 32270767-32278946 Malus domestica
MD04G1248300 0.5kb upstream 0.5kb upstream 500 false Chr04: 32278447-32278946 Malus domestica
MD04G1248300 0.5kb downstream 0.5kb downstream 8180 true Chr04: 32270267-32278446 Malus domestica
MD04G1248300 0.5kb downstream 0.5kb downstream 500 false Chr04: 32270267-32270766 Malus domestica
MD04G1248300 1.0kb upstream 1.0kb upstream 8680 true Chr04: 32270767-32279446 Malus domestica
MD04G1248300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 32278447-32279446 Malus domestica
MD04G1248300 1.0kb downstream 1.0kb downstream 8680 true Chr04: 32269767-32278446 Malus domestica
MD04G1248300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 32269767-32270766 Malus domestica
MD04G1248300 2.0kb upstream 2.0kb upstream 9680 true Chr04: 32270767-32280446 Malus domestica
MD04G1248300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 32278447-32280446 Malus domestica
MD04G1248300 2.0kb downstream 2.0kb downstream 9680 true Chr04: 32268767-32278446 Malus domestica
MD04G1248300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 32268767-32270766 Malus domestica
MD04G1248300 5.0kb upstream 5.0kb upstream 12680 true Chr04: 32270767-32283446 Malus domestica
MD04G1248300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 32278447-32283446 Malus domestica
MD04G1248300 5.0kb downstream 5.0kb downstream 12680 true Chr04: 32265767-32278446 Malus domestica
MD04G1248300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 32265767-32270766 Malus domestica
MD04G1248300 10.0kb upstream 10.0kb upstream 17680 true Chr04: 32270767-32288446 Malus domestica
MD04G1248300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 32278447-32288446 Malus domestica
MD04G1248300 10.0kb downstream 10.0kb downstream 17680 true Chr04: 32260767-32278446 Malus domestica
MD04G1248300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 32260767-32270766 Malus domestica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314915 5265 Fabidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain