Gene : MD12G1124500 M. domestica v1.1
Defline:  (1 of 3) K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Genomic Order:  1042
Name:  ? MD12G1124500 Secondary Identifier:  ? PAC:40121968
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mdomestica PWY-7511 Malus domestica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MD12G1124500 0.5kb upstream 0.5kb upstream 8235 true Chr12: 19953224-19961458 Malus domestica
MD12G1124500 0.5kb upstream 0.5kb upstream 500 false Chr12: 19960959-19961458 Malus domestica
MD12G1124500 0.5kb downstream 0.5kb downstream 8235 true Chr12: 19952724-19960958 Malus domestica
MD12G1124500 0.5kb downstream 0.5kb downstream 500 false Chr12: 19952724-19953223 Malus domestica
MD12G1124500 1.0kb upstream 1.0kb upstream 8735 true Chr12: 19953224-19961958 Malus domestica
MD12G1124500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 19960959-19961958 Malus domestica
MD12G1124500 1.0kb downstream 1.0kb downstream 8735 true Chr12: 19952224-19960958 Malus domestica
MD12G1124500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 19952224-19953223 Malus domestica
MD12G1124500 2.0kb upstream 2.0kb upstream 9735 true Chr12: 19953224-19962958 Malus domestica
MD12G1124500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 19960959-19962958 Malus domestica
MD12G1124500 2.0kb downstream 2.0kb downstream 9735 true Chr12: 19951224-19960958 Malus domestica
MD12G1124500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 19951224-19953223 Malus domestica
MD12G1124500 5.0kb upstream 5.0kb upstream 12735 true Chr12: 19953224-19965958 Malus domestica
MD12G1124500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 19960959-19965958 Malus domestica
MD12G1124500 5.0kb downstream 5.0kb downstream 12735 true Chr12: 19948224-19960958 Malus domestica
MD12G1124500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 19948224-19953223 Malus domestica
MD12G1124500 10.0kb upstream 10.0kb upstream 17735 true Chr12: 19953224-19970958 Malus domestica
MD12G1124500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 19960959-19970958 Malus domestica
MD12G1124500 10.0kb downstream 10.0kb downstream 17735 true Chr12: 19943224-19960958 Malus domestica
MD12G1124500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 19943224-19953223 Malus domestica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301785 5265 Fabidae View MSA
124066546 5270 Rosid View MSA
123736938 5271 Pentapetalae View MSA
122796953 5272 Eudicot View MSA
122044351 5273 Angiosperm View MSA
121310283 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain