Gene : Ca_11779 C. arietinum v1.0
Defline:  (1 of 63) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  2100
Name:  ? Ca_11779 Secondary Identifier:  ? PAC:40141155
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum PWY-1081 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_11779 0.5kb upstream 0.5kb upstream 4039 true Ca7: 29262061-29266099 Cicer arietinum
Ca_11779 0.5kb upstream 0.5kb upstream 500 false Ca7: 29262061-29262560 Cicer arietinum
Ca_11779 0.5kb downstream 0.5kb downstream 4039 true Ca7: 29262561-29266599 Cicer arietinum
Ca_11779 0.5kb downstream 0.5kb downstream 500 false Ca7: 29266100-29266599 Cicer arietinum
Ca_11779 1.0kb upstream 1.0kb upstream 4539 true Ca7: 29261561-29266099 Cicer arietinum
Ca_11779 1.0kb upstream 1.0kb upstream 1000 false Ca7: 29261561-29262560 Cicer arietinum
Ca_11779 1.0kb downstream 1.0kb downstream 4539 true Ca7: 29262561-29267099 Cicer arietinum
Ca_11779 1.0kb downstream 1.0kb downstream 1000 false Ca7: 29266100-29267099 Cicer arietinum
Ca_11779 2.0kb upstream 2.0kb upstream 5539 true Ca7: 29260561-29266099 Cicer arietinum
Ca_11779 2.0kb upstream 2.0kb upstream 2000 false Ca7: 29260561-29262560 Cicer arietinum
Ca_11779 2.0kb downstream 2.0kb downstream 5539 true Ca7: 29262561-29268099 Cicer arietinum
Ca_11779 2.0kb downstream 2.0kb downstream 2000 false Ca7: 29266100-29268099 Cicer arietinum
Ca_11779 5.0kb upstream 5.0kb upstream 8539 true Ca7: 29257561-29266099 Cicer arietinum
Ca_11779 5.0kb upstream 5.0kb upstream 5000 false Ca7: 29257561-29262560 Cicer arietinum
Ca_11779 5.0kb downstream 5.0kb downstream 8539 true Ca7: 29262561-29271099 Cicer arietinum
Ca_11779 5.0kb downstream 5.0kb downstream 5000 false Ca7: 29266100-29271099 Cicer arietinum
Ca_11779 10.0kb upstream 10.0kb upstream 13539 true Ca7: 29252561-29266099 Cicer arietinum
Ca_11779 10.0kb upstream 10.0kb upstream 10000 false Ca7: 29252561-29262560 Cicer arietinum
Ca_11779 10.0kb downstream 10.0kb downstream 13539 true Ca7: 29262561-29276099 Cicer arietinum
Ca_11779 10.0kb downstream 10.0kb downstream 10000 false Ca7: 29266100-29276099 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297857 5265 Fabidae View MSA
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain