Gene : Ca_24848 C. arietinum v1.0
Defline:  (1 of 63) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  1107
Name:  ? Ca_24848 Secondary Identifier:  ? PAC:40138750
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum PWY-1081 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_24848 0.5kb upstream 0.5kb upstream 3893 true Ca6: 12316139-12320031 Cicer arietinum
Ca_24848 0.5kb upstream 0.5kb upstream 500 false Ca6: 12319532-12320031 Cicer arietinum
Ca_24848 0.5kb downstream 0.5kb downstream 3893 true Ca6: 12315639-12319531 Cicer arietinum
Ca_24848 0.5kb downstream 0.5kb downstream 500 false Ca6: 12315639-12316138 Cicer arietinum
Ca_24848 1.0kb upstream 1.0kb upstream 4393 true Ca6: 12316139-12320531 Cicer arietinum
Ca_24848 1.0kb upstream 1.0kb upstream 1000 false Ca6: 12319532-12320531 Cicer arietinum
Ca_24848 1.0kb downstream 1.0kb downstream 4393 true Ca6: 12315139-12319531 Cicer arietinum
Ca_24848 1.0kb downstream 1.0kb downstream 1000 false Ca6: 12315139-12316138 Cicer arietinum
Ca_24848 2.0kb upstream 2.0kb upstream 5393 true Ca6: 12316139-12321531 Cicer arietinum
Ca_24848 2.0kb upstream 2.0kb upstream 2000 false Ca6: 12319532-12321531 Cicer arietinum
Ca_24848 2.0kb downstream 2.0kb downstream 5393 true Ca6: 12314139-12319531 Cicer arietinum
Ca_24848 2.0kb downstream 2.0kb downstream 2000 false Ca6: 12314139-12316138 Cicer arietinum
Ca_24848 5.0kb upstream 5.0kb upstream 8393 true Ca6: 12316139-12324531 Cicer arietinum
Ca_24848 5.0kb upstream 5.0kb upstream 5000 false Ca6: 12319532-12324531 Cicer arietinum
Ca_24848 5.0kb downstream 5.0kb downstream 8393 true Ca6: 12311139-12319531 Cicer arietinum
Ca_24848 5.0kb downstream 5.0kb downstream 5000 false Ca6: 12311139-12316138 Cicer arietinum
Ca_24848 10.0kb upstream 10.0kb upstream 13393 true Ca6: 12316139-12329531 Cicer arietinum
Ca_24848 10.0kb upstream 10.0kb upstream 10000 false Ca6: 12319532-12329531 Cicer arietinum
Ca_24848 10.0kb downstream 10.0kb downstream 13393 true Ca6: 12306139-12319531 Cicer arietinum
Ca_24848 10.0kb downstream 10.0kb downstream 10000 false Ca6: 12306139-12316138 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314178 5265 Fabidae View MSA
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain