Gene : Ca_18050 C. arietinum v1.0
Defline:  (1 of 1) K01899 - succinyl-CoA synthetase alpha subunit (LSC1) Genomic Order:  44
Name:  ? Ca_18050 Secondary Identifier:  ? PAC:40152472
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum PWY-5464 Cicer arietinum pathologic  
Carietinum PWY-5690 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_18050 0.5kb upstream 0.5kb upstream 4304 true scaffold1006: 642733-647036 Cicer arietinum
Ca_18050 0.5kb upstream 0.5kb upstream 500 false scaffold1006: 646537-647036 Cicer arietinum
Ca_18050 0.5kb downstream 0.5kb downstream 4304 true scaffold1006: 642233-646536 Cicer arietinum
Ca_18050 0.5kb downstream 0.5kb downstream 500 false scaffold1006: 642233-642732 Cicer arietinum
Ca_18050 1.0kb upstream 1.0kb upstream 4804 true scaffold1006: 642733-647536 Cicer arietinum
Ca_18050 1.0kb upstream 1.0kb upstream 1000 false scaffold1006: 646537-647536 Cicer arietinum
Ca_18050 1.0kb downstream 1.0kb downstream 4804 true scaffold1006: 641733-646536 Cicer arietinum
Ca_18050 1.0kb downstream 1.0kb downstream 1000 false scaffold1006: 641733-642732 Cicer arietinum
Ca_18050 2.0kb upstream 2.0kb upstream 5804 true scaffold1006: 642733-648536 Cicer arietinum
Ca_18050 2.0kb upstream 2.0kb upstream 2000 false scaffold1006: 646537-648536 Cicer arietinum
Ca_18050 2.0kb downstream 2.0kb downstream 5804 true scaffold1006: 640733-646536 Cicer arietinum
Ca_18050 2.0kb downstream 2.0kb downstream 2000 false scaffold1006: 640733-642732 Cicer arietinum
Ca_18050 5.0kb upstream 5.0kb upstream 8804 true scaffold1006: 642733-651536 Cicer arietinum
Ca_18050 5.0kb upstream 5.0kb upstream 5000 false scaffold1006: 646537-651536 Cicer arietinum
Ca_18050 5.0kb downstream 5.0kb downstream 8804 true scaffold1006: 637733-646536 Cicer arietinum
Ca_18050 5.0kb downstream 5.0kb downstream 5000 false scaffold1006: 637733-642732 Cicer arietinum
Ca_18050 10.0kb upstream 10.0kb upstream 13804 true scaffold1006: 642733-656536 Cicer arietinum
Ca_18050 10.0kb upstream 10.0kb upstream 10000 false scaffold1006: 646537-656536 Cicer arietinum
Ca_18050 10.0kb downstream 10.0kb downstream 13804 true scaffold1006: 632733-646536 Cicer arietinum
Ca_18050 10.0kb downstream 10.0kb downstream 10000 false scaffold1006: 632733-642732 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300000 5265 Fabidae View MSA
124071271 5270 Rosid View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain