Gene : Ca_23650 C. arietinum v1.0

Defline:  (1 of 1) K08907 - light-harvesting complex I chlorophyll a/b binding protein 1 (LHCA1) Genomic Order:  6
Name:  ? Ca_23650 Secondary Identifier:  ? PAC:40154144

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_23650 0.5kb upstream 0.5kb upstream 1826 true scaffold1439: 136318-138143 Cicer arietinum
Ca_23650 0.5kb upstream 0.5kb upstream 500 false scaffold1439: 136318-136817 Cicer arietinum
Ca_23650 0.5kb downstream 0.5kb downstream 1826 true scaffold1439: 136818-138643 Cicer arietinum
Ca_23650 0.5kb downstream 0.5kb downstream 500 false scaffold1439: 138144-138643 Cicer arietinum
Ca_23650 1.0kb upstream 1.0kb upstream 2326 true scaffold1439: 135818-138143 Cicer arietinum
Ca_23650 1.0kb upstream 1.0kb upstream 1000 false scaffold1439: 135818-136817 Cicer arietinum
Ca_23650 1.0kb downstream 1.0kb downstream 2326 true scaffold1439: 136818-139143 Cicer arietinum
Ca_23650 1.0kb downstream 1.0kb downstream 1000 false scaffold1439: 138144-139143 Cicer arietinum
Ca_23650 2.0kb upstream 2.0kb upstream 3326 true scaffold1439: 134818-138143 Cicer arietinum
Ca_23650 2.0kb upstream 2.0kb upstream 2000 false scaffold1439: 134818-136817 Cicer arietinum
Ca_23650 2.0kb downstream 2.0kb downstream 3326 true scaffold1439: 136818-140143 Cicer arietinum
Ca_23650 2.0kb downstream 2.0kb downstream 2000 false scaffold1439: 138144-140143 Cicer arietinum
Ca_23650 5.0kb upstream 5.0kb upstream 6326 true scaffold1439: 131818-138143 Cicer arietinum
Ca_23650 5.0kb upstream 5.0kb upstream 5000 false scaffold1439: 131818-136817 Cicer arietinum
Ca_23650 5.0kb downstream 5.0kb downstream 6326 true scaffold1439: 136818-143143 Cicer arietinum
Ca_23650 5.0kb downstream 5.0kb downstream 5000 false scaffold1439: 138144-143143 Cicer arietinum
Ca_23650 10.0kb upstream 10.0kb upstream 11326 true scaffold1439: 126818-138143 Cicer arietinum
Ca_23650 10.0kb upstream 10.0kb upstream 10000 false scaffold1439: 126818-136817 Cicer arietinum
Ca_23650 10.0kb downstream 10.0kb downstream 11326 true scaffold1439: 136818-148143 Cicer arietinum
Ca_23650 10.0kb downstream 10.0kb downstream 10000 false scaffold1439: 138144-148143 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301540 5265 Fabidae View MSA
124067443 5270 Rosid View MSA
123742778 5271 Pentapetalae View MSA
122793443 5272 Eudicot View MSA
122044861 5273 Angiosperm View MSA
121344658 5274 Embryophyte View MSA
123424228 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain