Gene : Ca_11876 C. arietinum v1.0
Defline:  (1 of 2) PTHR11558//PTHR11558:SF30 - SPERMIDINE/SPERMINE SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  62
Name:  ? Ca_11876 Secondary Identifier:  ? PAC:40154016
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum BSUBPOLYAMSYN-PWY Cicer arietinum pathologic  
Carietinum POLYAMINSYN3-PWY Cicer arietinum pathologic  
Carietinum PWY-7528 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_11876 0.5kb upstream 0.5kb upstream 2768 true Ca8: 597400-600167 Cicer arietinum
Ca_11876 0.5kb upstream 0.5kb upstream 500 false Ca8: 599668-600167 Cicer arietinum
Ca_11876 0.5kb downstream 0.5kb downstream 2768 true Ca8: 596900-599667 Cicer arietinum
Ca_11876 0.5kb downstream 0.5kb downstream 500 false Ca8: 596900-597399 Cicer arietinum
Ca_11876 1.0kb upstream 1.0kb upstream 3268 true Ca8: 597400-600667 Cicer arietinum
Ca_11876 1.0kb upstream 1.0kb upstream 1000 false Ca8: 599668-600667 Cicer arietinum
Ca_11876 1.0kb downstream 1.0kb downstream 3268 true Ca8: 596400-599667 Cicer arietinum
Ca_11876 1.0kb downstream 1.0kb downstream 1000 false Ca8: 596400-597399 Cicer arietinum
Ca_11876 2.0kb upstream 2.0kb upstream 4268 true Ca8: 597400-601667 Cicer arietinum
Ca_11876 2.0kb upstream 2.0kb upstream 2000 false Ca8: 599668-601667 Cicer arietinum
Ca_11876 2.0kb downstream 2.0kb downstream 4268 true Ca8: 595400-599667 Cicer arietinum
Ca_11876 2.0kb downstream 2.0kb downstream 2000 false Ca8: 595400-597399 Cicer arietinum
Ca_11876 5.0kb upstream 5.0kb upstream 7268 true Ca8: 597400-604667 Cicer arietinum
Ca_11876 5.0kb upstream 5.0kb upstream 5000 false Ca8: 599668-604667 Cicer arietinum
Ca_11876 5.0kb downstream 5.0kb downstream 7268 true Ca8: 592400-599667 Cicer arietinum
Ca_11876 5.0kb downstream 5.0kb downstream 5000 false Ca8: 592400-597399 Cicer arietinum
Ca_11876 10.0kb upstream 10.0kb upstream 12268 true Ca8: 597400-609667 Cicer arietinum
Ca_11876 10.0kb upstream 10.0kb upstream 10000 false Ca8: 599668-609667 Cicer arietinum
Ca_11876 10.0kb downstream 10.0kb downstream 12268 true Ca8: 587400-599667 Cicer arietinum
Ca_11876 10.0kb downstream 10.0kb downstream 10000 false Ca8: 587400-597399 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312400 5265 Fabidae View MSA
124069905 5270 Rosid View MSA
123748388 5271 Pentapetalae View MSA
122794179 5272 Eudicot View MSA
122050339 5273 Angiosperm View MSA
121346949 5274 Embryophyte View MSA
123426712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain