Gene : Ca_27499 C. arietinum v1.0

Defline:  (1 of 2) PTHR12953 - MEMBRANE PROTEIN CH1 RELATED Genomic Order:  1
Name:  ? Ca_27499 Secondary Identifier:  ? PAC:40160022

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_27499 0.5kb upstream 0.5kb upstream 2720 true scaffold1475: 9434-12153 Cicer arietinum
Ca_27499 0.5kb upstream 0.5kb upstream 500 false scaffold1475: 9434-9933 Cicer arietinum
Ca_27499 0.5kb downstream 0.5kb downstream 2720 true scaffold1475: 9934-12653 Cicer arietinum
Ca_27499 0.5kb downstream 0.5kb downstream 500 false scaffold1475: 12154-12653 Cicer arietinum
Ca_27499 1.0kb upstream 1.0kb upstream 3220 true scaffold1475: 8934-12153 Cicer arietinum
Ca_27499 1.0kb upstream 1.0kb upstream 1000 false scaffold1475: 8934-9933 Cicer arietinum
Ca_27499 1.0kb downstream 1.0kb downstream 3220 true scaffold1475: 9934-13153 Cicer arietinum
Ca_27499 1.0kb downstream 1.0kb downstream 1000 false scaffold1475: 12154-13153 Cicer arietinum
Ca_27499 2.0kb upstream 2.0kb upstream 4220 true scaffold1475: 7934-12153 Cicer arietinum
Ca_27499 2.0kb upstream 2.0kb upstream 2000 false scaffold1475: 7934-9933 Cicer arietinum
Ca_27499 2.0kb downstream 2.0kb downstream 4220 true scaffold1475: 9934-14153 Cicer arietinum
Ca_27499 2.0kb downstream 2.0kb downstream 2000 false scaffold1475: 12154-14153 Cicer arietinum
Ca_27499 5.0kb upstream 5.0kb upstream 7220 true scaffold1475: 4934-12153 Cicer arietinum
Ca_27499 5.0kb upstream 5.0kb upstream 5000 false scaffold1475: 4934-9933 Cicer arietinum
Ca_27499 5.0kb downstream 5.0kb downstream 7220 true scaffold1475: 9934-17153 Cicer arietinum
Ca_27499 5.0kb downstream 5.0kb downstream 5000 false scaffold1475: 12154-17153 Cicer arietinum
Ca_27499 10.0kb upstream 10.0kb upstream 12153 true scaffold1475: 1-12153 Cicer arietinum
Ca_27499 10.0kb upstream 10.0kb upstream 9933 false scaffold1475: 1-9933 Cicer arietinum
Ca_27499 10.0kb downstream 10.0kb downstream 12220 true scaffold1475: 9934-22153 Cicer arietinum
Ca_27499 10.0kb downstream 10.0kb downstream 10000 false scaffold1475: 12154-22153 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310796 5265 Fabidae View MSA
124061836 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain