Gene : Ca_27474 C. arietinum v1.0
Defline:  (1 of 2) K02703 - photosystem II P680 reaction center D1 protein (psbA) Genomic Order:  3
Name:  ? Ca_27474 Secondary Identifier:  ? PAC:40159659
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum PHOTOALL-PWY Cicer arietinum pathologic  
Carietinum PWY-101 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_27474 0.5kb upstream 0.5kb upstream 1451 true scaffold1613: 106419-107869 Cicer arietinum
Ca_27474 0.5kb upstream 0.5kb upstream 500 false scaffold1613: 106419-106918 Cicer arietinum
Ca_27474 0.5kb downstream 0.5kb downstream 1451 true scaffold1613: 106919-108369 Cicer arietinum
Ca_27474 0.5kb downstream 0.5kb downstream 500 false scaffold1613: 107870-108369 Cicer arietinum
Ca_27474 1.0kb upstream 1.0kb upstream 1951 true scaffold1613: 105919-107869 Cicer arietinum
Ca_27474 1.0kb upstream 1.0kb upstream 1000 false scaffold1613: 105919-106918 Cicer arietinum
Ca_27474 1.0kb downstream 1.0kb downstream 1951 true scaffold1613: 106919-108869 Cicer arietinum
Ca_27474 1.0kb downstream 1.0kb downstream 1000 false scaffold1613: 107870-108869 Cicer arietinum
Ca_27474 2.0kb upstream 2.0kb upstream 2951 true scaffold1613: 104919-107869 Cicer arietinum
Ca_27474 2.0kb upstream 2.0kb upstream 2000 false scaffold1613: 104919-106918 Cicer arietinum
Ca_27474 2.0kb downstream 2.0kb downstream 2951 true scaffold1613: 106919-109869 Cicer arietinum
Ca_27474 2.0kb downstream 2.0kb downstream 2000 false scaffold1613: 107870-109869 Cicer arietinum
Ca_27474 5.0kb upstream 5.0kb upstream 5951 true scaffold1613: 101919-107869 Cicer arietinum
Ca_27474 5.0kb upstream 5.0kb upstream 5000 false scaffold1613: 101919-106918 Cicer arietinum
Ca_27474 5.0kb downstream 5.0kb downstream 5951 true scaffold1613: 106919-112869 Cicer arietinum
Ca_27474 5.0kb downstream 5.0kb downstream 5000 false scaffold1613: 107870-112869 Cicer arietinum
Ca_27474 10.0kb upstream 10.0kb upstream 10951 true scaffold1613: 96919-107869 Cicer arietinum
Ca_27474 10.0kb upstream 10.0kb upstream 10000 false scaffold1613: 96919-106918 Cicer arietinum
Ca_27474 10.0kb downstream 10.0kb downstream 10951 true scaffold1613: 106919-117869 Cicer arietinum
Ca_27474 10.0kb downstream 10.0kb downstream 10000 false scaffold1613: 107870-117869 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295968 5265 Fabidae View MSA
124074858 5270 Rosid View MSA
123753555 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain