Gene : Ca_27642 C. arietinum v1.0

Defline:  (1 of 1) K03046 - DNA-directed RNA polymerase subunit beta' (rpoC) Genomic Order:  1
Name:  ? Ca_27642 Secondary Identifier:  ? PAC:40144084

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_27642 0.5kb upstream 0.5kb upstream 3929 true scaffold1708: 70105-74033 Cicer arietinum
Ca_27642 0.5kb upstream 0.5kb upstream 500 false scaffold1708: 73534-74033 Cicer arietinum
Ca_27642 0.5kb downstream 0.5kb downstream 3929 true scaffold1708: 69605-73533 Cicer arietinum
Ca_27642 0.5kb downstream 0.5kb downstream 500 false scaffold1708: 69605-70104 Cicer arietinum
Ca_27642 1.0kb upstream 1.0kb upstream 4429 true scaffold1708: 70105-74533 Cicer arietinum
Ca_27642 1.0kb upstream 1.0kb upstream 1000 false scaffold1708: 73534-74533 Cicer arietinum
Ca_27642 1.0kb downstream 1.0kb downstream 4429 true scaffold1708: 69105-73533 Cicer arietinum
Ca_27642 1.0kb downstream 1.0kb downstream 1000 false scaffold1708: 69105-70104 Cicer arietinum
Ca_27642 2.0kb upstream 2.0kb upstream 5429 true scaffold1708: 70105-75533 Cicer arietinum
Ca_27642 2.0kb upstream 2.0kb upstream 2000 false scaffold1708: 73534-75533 Cicer arietinum
Ca_27642 2.0kb downstream 2.0kb downstream 5429 true scaffold1708: 68105-73533 Cicer arietinum
Ca_27642 2.0kb downstream 2.0kb downstream 2000 false scaffold1708: 68105-70104 Cicer arietinum
Ca_27642 5.0kb upstream 5.0kb upstream 8429 true scaffold1708: 70105-78533 Cicer arietinum
Ca_27642 5.0kb upstream 5.0kb upstream 5000 false scaffold1708: 73534-78533 Cicer arietinum
Ca_27642 5.0kb downstream 5.0kb downstream 8429 true scaffold1708: 65105-73533 Cicer arietinum
Ca_27642 5.0kb downstream 5.0kb downstream 5000 false scaffold1708: 65105-70104 Cicer arietinum
Ca_27642 10.0kb upstream 10.0kb upstream 13429 true scaffold1708: 70105-83533 Cicer arietinum
Ca_27642 10.0kb upstream 10.0kb upstream 10000 false scaffold1708: 73534-83533 Cicer arietinum
Ca_27642 10.0kb downstream 10.0kb downstream 13429 true scaffold1708: 60105-73533 Cicer arietinum
Ca_27642 10.0kb downstream 10.0kb downstream 10000 false scaffold1708: 60105-70104 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295191 5265 Fabidae View MSA
124037986 5270 Rosid View MSA
123751683 5271 Pentapetalae View MSA
122774135 5272 Eudicot View MSA
122050148 5273 Angiosperm View MSA
121311763 5274 Embryophyte View MSA
123426642 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain