Gene : Ca_26001 C. arietinum v1.0
Defline:  (1 of 1) PTHR23083//PTHR23083:SF397 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED Genomic Order:  4
Name:  ? Ca_26001 Secondary Identifier:  ? PAC:40139222
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum PWY-7437 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_26001 0.5kb upstream 0.5kb upstream 10204 true scaffold1810: 74569-84772 Cicer arietinum
Ca_26001 0.5kb upstream 0.5kb upstream 500 false scaffold1810: 74569-75068 Cicer arietinum
Ca_26001 0.5kb downstream 0.5kb downstream 10204 true scaffold1810: 75069-85272 Cicer arietinum
Ca_26001 0.5kb downstream 0.5kb downstream 500 false scaffold1810: 84773-85272 Cicer arietinum
Ca_26001 1.0kb upstream 1.0kb upstream 10704 true scaffold1810: 74069-84772 Cicer arietinum
Ca_26001 1.0kb upstream 1.0kb upstream 1000 false scaffold1810: 74069-75068 Cicer arietinum
Ca_26001 1.0kb downstream 1.0kb downstream 10704 true scaffold1810: 75069-85772 Cicer arietinum
Ca_26001 1.0kb downstream 1.0kb downstream 1000 false scaffold1810: 84773-85772 Cicer arietinum
Ca_26001 2.0kb upstream 2.0kb upstream 11704 true scaffold1810: 73069-84772 Cicer arietinum
Ca_26001 2.0kb upstream 2.0kb upstream 2000 false scaffold1810: 73069-75068 Cicer arietinum
Ca_26001 2.0kb downstream 2.0kb downstream 11704 true scaffold1810: 75069-86772 Cicer arietinum
Ca_26001 2.0kb downstream 2.0kb downstream 2000 false scaffold1810: 84773-86772 Cicer arietinum
Ca_26001 5.0kb upstream 5.0kb upstream 14704 true scaffold1810: 70069-84772 Cicer arietinum
Ca_26001 5.0kb upstream 5.0kb upstream 5000 false scaffold1810: 70069-75068 Cicer arietinum
Ca_26001 5.0kb downstream 5.0kb downstream 14704 true scaffold1810: 75069-89772 Cicer arietinum
Ca_26001 5.0kb downstream 5.0kb downstream 5000 false scaffold1810: 84773-89772 Cicer arietinum
Ca_26001 10.0kb upstream 10.0kb upstream 19704 true scaffold1810: 65069-84772 Cicer arietinum
Ca_26001 10.0kb upstream 10.0kb upstream 10000 false scaffold1810: 65069-75068 Cicer arietinum
Ca_26001 10.0kb downstream 10.0kb downstream 19704 true scaffold1810: 75069-94772 Cicer arietinum
Ca_26001 10.0kb downstream 10.0kb downstream 10000 false scaffold1810: 84773-94772 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303349 5265 Fabidae View MSA
124065064 5270 Rosid View MSA
123739134 5271 Pentapetalae View MSA
122791595 5272 Eudicot View MSA
122044417 5273 Angiosperm View MSA
121347707 5274 Embryophyte View MSA
123428836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain