Gene : Ca_04866 C. arietinum v1.0

Defline:  (1 of 1) K15452 - tRNA pseudouridine synthase 2 [EC:5.4.99.-] (PUS2) Genomic Order:  1532
Name:  ? Ca_04866 Secondary Identifier:  ? PAC:40160104

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_04866 0.5kb upstream 0.5kb upstream 7065 true Ca5: 31649247-31656311 Cicer arietinum
Ca_04866 0.5kb upstream 0.5kb upstream 500 false Ca5: 31655812-31656311 Cicer arietinum
Ca_04866 0.5kb downstream 0.5kb downstream 7065 true Ca5: 31648747-31655811 Cicer arietinum
Ca_04866 0.5kb downstream 0.5kb downstream 500 false Ca5: 31648747-31649246 Cicer arietinum
Ca_04866 1.0kb upstream 1.0kb upstream 7565 true Ca5: 31649247-31656811 Cicer arietinum
Ca_04866 1.0kb upstream 1.0kb upstream 1000 false Ca5: 31655812-31656811 Cicer arietinum
Ca_04866 1.0kb downstream 1.0kb downstream 7565 true Ca5: 31648247-31655811 Cicer arietinum
Ca_04866 1.0kb downstream 1.0kb downstream 1000 false Ca5: 31648247-31649246 Cicer arietinum
Ca_04866 2.0kb upstream 2.0kb upstream 8565 true Ca5: 31649247-31657811 Cicer arietinum
Ca_04866 2.0kb upstream 2.0kb upstream 2000 false Ca5: 31655812-31657811 Cicer arietinum
Ca_04866 2.0kb downstream 2.0kb downstream 8565 true Ca5: 31647247-31655811 Cicer arietinum
Ca_04866 2.0kb downstream 2.0kb downstream 2000 false Ca5: 31647247-31649246 Cicer arietinum
Ca_04866 5.0kb upstream 5.0kb upstream 11565 true Ca5: 31649247-31660811 Cicer arietinum
Ca_04866 5.0kb upstream 5.0kb upstream 5000 false Ca5: 31655812-31660811 Cicer arietinum
Ca_04866 5.0kb downstream 5.0kb downstream 11565 true Ca5: 31644247-31655811 Cicer arietinum
Ca_04866 5.0kb downstream 5.0kb downstream 5000 false Ca5: 31644247-31649246 Cicer arietinum
Ca_04866 10.0kb upstream 10.0kb upstream 16565 true Ca5: 31649247-31665811 Cicer arietinum
Ca_04866 10.0kb upstream 10.0kb upstream 10000 false Ca5: 31655812-31665811 Cicer arietinum
Ca_04866 10.0kb downstream 10.0kb downstream 16565 true Ca5: 31639247-31655811 Cicer arietinum
Ca_04866 10.0kb downstream 10.0kb downstream 10000 false Ca5: 31639247-31649246 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297491 5265 Fabidae View MSA
124067698 5270 Rosid View MSA
123740494 5271 Pentapetalae View MSA
122788913 5272 Eudicot View MSA
122047561 5273 Angiosperm View MSA
121344474 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain