Gene : Ca_07541 C. arietinum v1.0
Defline:  (1 of 2) PTHR11404//PTHR11404:SF17 - SUPEROXIDE DISMUTASE 2 // SUPEROXIDE DISMUTASE [FE] 3, CHLOROPLASTIC Genomic Order:  2370
Name:  ? Ca_07541 Secondary Identifier:  ? PAC:40161830
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum DETOX1-PWY Cicer arietinum pathologic  
Carietinum DETOX1-PWY-1 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_07541 0.5kb upstream 0.5kb upstream 3008 true Ca5: 40176778-40179785 Cicer arietinum
Ca_07541 0.5kb upstream 0.5kb upstream 500 false Ca5: 40179286-40179785 Cicer arietinum
Ca_07541 0.5kb downstream 0.5kb downstream 3008 true Ca5: 40176278-40179285 Cicer arietinum
Ca_07541 0.5kb downstream 0.5kb downstream 500 false Ca5: 40176278-40176777 Cicer arietinum
Ca_07541 1.0kb upstream 1.0kb upstream 3508 true Ca5: 40176778-40180285 Cicer arietinum
Ca_07541 1.0kb upstream 1.0kb upstream 1000 false Ca5: 40179286-40180285 Cicer arietinum
Ca_07541 1.0kb downstream 1.0kb downstream 3508 true Ca5: 40175778-40179285 Cicer arietinum
Ca_07541 1.0kb downstream 1.0kb downstream 1000 false Ca5: 40175778-40176777 Cicer arietinum
Ca_07541 2.0kb upstream 2.0kb upstream 4508 true Ca5: 40176778-40181285 Cicer arietinum
Ca_07541 2.0kb upstream 2.0kb upstream 2000 false Ca5: 40179286-40181285 Cicer arietinum
Ca_07541 2.0kb downstream 2.0kb downstream 4508 true Ca5: 40174778-40179285 Cicer arietinum
Ca_07541 2.0kb downstream 2.0kb downstream 2000 false Ca5: 40174778-40176777 Cicer arietinum
Ca_07541 5.0kb upstream 5.0kb upstream 7508 true Ca5: 40176778-40184285 Cicer arietinum
Ca_07541 5.0kb upstream 5.0kb upstream 5000 false Ca5: 40179286-40184285 Cicer arietinum
Ca_07541 5.0kb downstream 5.0kb downstream 7508 true Ca5: 40171778-40179285 Cicer arietinum
Ca_07541 5.0kb downstream 5.0kb downstream 5000 false Ca5: 40171778-40176777 Cicer arietinum
Ca_07541 10.0kb upstream 10.0kb upstream 12508 true Ca5: 40176778-40189285 Cicer arietinum
Ca_07541 10.0kb upstream 10.0kb upstream 10000 false Ca5: 40179286-40189285 Cicer arietinum
Ca_07541 10.0kb downstream 10.0kb downstream 12508 true Ca5: 40166778-40179285 Cicer arietinum
Ca_07541 10.0kb downstream 10.0kb downstream 10000 false Ca5: 40166778-40176777 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307249 5265 Fabidae View MSA
124067465 5270 Rosid View MSA
123740223 5271 Pentapetalae View MSA
122788752 5272 Eudicot View MSA
122044976 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain