Gene : Ca_04690 C. arietinum v1.0
Defline:  (1 of 1) PTHR11777:SF14 - ALANINE--TRNA LIGASE, CHLOROPLASTIC-RELATED Genomic Order:  1356
Name:  ? Ca_04690 Secondary Identifier:  ? PAC:40162899
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum TRNA-CHARGING-PWY Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_04690 0.5kb upstream 0.5kb upstream 9987 true Ca5: 30137146-30147132 Cicer arietinum
Ca_04690 0.5kb upstream 0.5kb upstream 500 false Ca5: 30146633-30147132 Cicer arietinum
Ca_04690 0.5kb downstream 0.5kb downstream 9987 true Ca5: 30136646-30146632 Cicer arietinum
Ca_04690 0.5kb downstream 0.5kb downstream 500 false Ca5: 30136646-30137145 Cicer arietinum
Ca_04690 1.0kb upstream 1.0kb upstream 10487 true Ca5: 30137146-30147632 Cicer arietinum
Ca_04690 1.0kb upstream 1.0kb upstream 1000 false Ca5: 30146633-30147632 Cicer arietinum
Ca_04690 1.0kb downstream 1.0kb downstream 10487 true Ca5: 30136146-30146632 Cicer arietinum
Ca_04690 1.0kb downstream 1.0kb downstream 1000 false Ca5: 30136146-30137145 Cicer arietinum
Ca_04690 2.0kb upstream 2.0kb upstream 11487 true Ca5: 30137146-30148632 Cicer arietinum
Ca_04690 2.0kb upstream 2.0kb upstream 2000 false Ca5: 30146633-30148632 Cicer arietinum
Ca_04690 2.0kb downstream 2.0kb downstream 11487 true Ca5: 30135146-30146632 Cicer arietinum
Ca_04690 2.0kb downstream 2.0kb downstream 2000 false Ca5: 30135146-30137145 Cicer arietinum
Ca_04690 5.0kb upstream 5.0kb upstream 14487 true Ca5: 30137146-30151632 Cicer arietinum
Ca_04690 5.0kb upstream 5.0kb upstream 5000 false Ca5: 30146633-30151632 Cicer arietinum
Ca_04690 5.0kb downstream 5.0kb downstream 14487 true Ca5: 30132146-30146632 Cicer arietinum
Ca_04690 5.0kb downstream 5.0kb downstream 5000 false Ca5: 30132146-30137145 Cicer arietinum
Ca_04690 10.0kb upstream 10.0kb upstream 19487 true Ca5: 30137146-30156632 Cicer arietinum
Ca_04690 10.0kb upstream 10.0kb upstream 10000 false Ca5: 30146633-30156632 Cicer arietinum
Ca_04690 10.0kb downstream 10.0kb downstream 19487 true Ca5: 30127146-30146632 Cicer arietinum
Ca_04690 10.0kb downstream 10.0kb downstream 10000 false Ca5: 30127146-30137145 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309054 5265 Fabidae View MSA
124064161 5270 Rosid View MSA
123740814 5271 Pentapetalae View MSA
122788872 5272 Eudicot View MSA
122048095 5273 Angiosperm View MSA
121348703 5274 Embryophyte View MSA
123425032 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain