Gene : Ca_12058 C. arietinum v1.0
Defline:  (1 of 1) PTHR11476//PTHR11476:SF5 - HISTIDYL-TRNA SYNTHETASE // CLASS II AARS AND BIOTIN SYNTHETASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  2032
Name:  ? Ca_12058 Secondary Identifier:  ? PAC:40154681
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum TRNA-CHARGING-PWY Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_12058 0.5kb upstream 0.5kb upstream 11545 true Ca3: 33228234-33239778 Cicer arietinum
Ca_12058 0.5kb upstream 0.5kb upstream 500 false Ca3: 33228234-33228733 Cicer arietinum
Ca_12058 0.5kb downstream 0.5kb downstream 11545 true Ca3: 33228734-33240278 Cicer arietinum
Ca_12058 0.5kb downstream 0.5kb downstream 500 false Ca3: 33239779-33240278 Cicer arietinum
Ca_12058 1.0kb upstream 1.0kb upstream 12045 true Ca3: 33227734-33239778 Cicer arietinum
Ca_12058 1.0kb upstream 1.0kb upstream 1000 false Ca3: 33227734-33228733 Cicer arietinum
Ca_12058 1.0kb downstream 1.0kb downstream 12045 true Ca3: 33228734-33240778 Cicer arietinum
Ca_12058 1.0kb downstream 1.0kb downstream 1000 false Ca3: 33239779-33240778 Cicer arietinum
Ca_12058 2.0kb upstream 2.0kb upstream 13045 true Ca3: 33226734-33239778 Cicer arietinum
Ca_12058 2.0kb upstream 2.0kb upstream 2000 false Ca3: 33226734-33228733 Cicer arietinum
Ca_12058 2.0kb downstream 2.0kb downstream 13045 true Ca3: 33228734-33241778 Cicer arietinum
Ca_12058 2.0kb downstream 2.0kb downstream 2000 false Ca3: 33239779-33241778 Cicer arietinum
Ca_12058 5.0kb upstream 5.0kb upstream 16045 true Ca3: 33223734-33239778 Cicer arietinum
Ca_12058 5.0kb upstream 5.0kb upstream 5000 false Ca3: 33223734-33228733 Cicer arietinum
Ca_12058 5.0kb downstream 5.0kb downstream 16045 true Ca3: 33228734-33244778 Cicer arietinum
Ca_12058 5.0kb downstream 5.0kb downstream 5000 false Ca3: 33239779-33244778 Cicer arietinum
Ca_12058 10.0kb upstream 10.0kb upstream 21045 true Ca3: 33218734-33239778 Cicer arietinum
Ca_12058 10.0kb upstream 10.0kb upstream 10000 false Ca3: 33218734-33228733 Cicer arietinum
Ca_12058 10.0kb downstream 10.0kb downstream 21045 true Ca3: 33228734-33249778 Cicer arietinum
Ca_12058 10.0kb downstream 10.0kb downstream 10000 false Ca3: 33239779-33249778 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303322 5265 Fabidae View MSA
124069172 5270 Rosid View MSA
123739559 5271 Pentapetalae View MSA
122792579 5272 Eudicot View MSA
122042038 5273 Angiosperm View MSA
121344697 5274 Embryophyte View MSA
123424484 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain