Gene : Ca_11988 C. arietinum v1.0
Defline:  (1 of 1) PF04571//PF08235//PF16876 - lipin, N-terminal conserved region (Lipin_N) // LNS2 (Lipin/Ned1/Smp2) (LNS2) // Lipin/Ned1/Smp2 multi-domain protein middle domain (Lipin_mid) Genomic Order:  1962
Name:  ? Ca_11988 Secondary Identifier:  ? PAC:40155740
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum TRIGLSYN-PWY Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_11988 0.5kb upstream 0.5kb upstream 4846 true Ca3: 32606176-32611021 Cicer arietinum
Ca_11988 0.5kb upstream 0.5kb upstream 500 false Ca3: 32610522-32611021 Cicer arietinum
Ca_11988 0.5kb downstream 0.5kb downstream 4846 true Ca3: 32605676-32610521 Cicer arietinum
Ca_11988 0.5kb downstream 0.5kb downstream 500 false Ca3: 32605676-32606175 Cicer arietinum
Ca_11988 1.0kb upstream 1.0kb upstream 5346 true Ca3: 32606176-32611521 Cicer arietinum
Ca_11988 1.0kb upstream 1.0kb upstream 1000 false Ca3: 32610522-32611521 Cicer arietinum
Ca_11988 1.0kb downstream 1.0kb downstream 5346 true Ca3: 32605176-32610521 Cicer arietinum
Ca_11988 1.0kb downstream 1.0kb downstream 1000 false Ca3: 32605176-32606175 Cicer arietinum
Ca_11988 2.0kb upstream 2.0kb upstream 6346 true Ca3: 32606176-32612521 Cicer arietinum
Ca_11988 2.0kb upstream 2.0kb upstream 2000 false Ca3: 32610522-32612521 Cicer arietinum
Ca_11988 2.0kb downstream 2.0kb downstream 6346 true Ca3: 32604176-32610521 Cicer arietinum
Ca_11988 2.0kb downstream 2.0kb downstream 2000 false Ca3: 32604176-32606175 Cicer arietinum
Ca_11988 5.0kb upstream 5.0kb upstream 9346 true Ca3: 32606176-32615521 Cicer arietinum
Ca_11988 5.0kb upstream 5.0kb upstream 5000 false Ca3: 32610522-32615521 Cicer arietinum
Ca_11988 5.0kb downstream 5.0kb downstream 9346 true Ca3: 32601176-32610521 Cicer arietinum
Ca_11988 5.0kb downstream 5.0kb downstream 5000 false Ca3: 32601176-32606175 Cicer arietinum
Ca_11988 10.0kb upstream 10.0kb upstream 14346 true Ca3: 32606176-32620521 Cicer arietinum
Ca_11988 10.0kb upstream 10.0kb upstream 10000 false Ca3: 32610522-32620521 Cicer arietinum
Ca_11988 10.0kb downstream 10.0kb downstream 14346 true Ca3: 32596176-32610521 Cicer arietinum
Ca_11988 10.0kb downstream 10.0kb downstream 10000 false Ca3: 32596176-32606175 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311900 5265 Fabidae View MSA
124065604 5270 Rosid View MSA
123741487 5271 Pentapetalae View MSA
122792824 5272 Eudicot View MSA
122048354 5273 Angiosperm View MSA
121350822 5274 Embryophyte View MSA
123381897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain