Gene : Ca_05906 C. arietinum v1.0
Defline:  (1 of 1) PTHR22594:SF34 - ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  341
Name:  ? Ca_05906 Secondary Identifier:  ? PAC:40138874
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum TRNA-CHARGING-PWY Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_05906 0.5kb upstream 0.5kb upstream 3817 true Ca6: 3951194-3955010 Cicer arietinum
Ca_05906 0.5kb upstream 0.5kb upstream 500 false Ca6: 3954511-3955010 Cicer arietinum
Ca_05906 0.5kb downstream 0.5kb downstream 3817 true Ca6: 3950694-3954510 Cicer arietinum
Ca_05906 0.5kb downstream 0.5kb downstream 500 false Ca6: 3950694-3951193 Cicer arietinum
Ca_05906 1.0kb upstream 1.0kb upstream 4317 true Ca6: 3951194-3955510 Cicer arietinum
Ca_05906 1.0kb upstream 1.0kb upstream 1000 false Ca6: 3954511-3955510 Cicer arietinum
Ca_05906 1.0kb downstream 1.0kb downstream 4317 true Ca6: 3950194-3954510 Cicer arietinum
Ca_05906 1.0kb downstream 1.0kb downstream 1000 false Ca6: 3950194-3951193 Cicer arietinum
Ca_05906 2.0kb upstream 2.0kb upstream 5317 true Ca6: 3951194-3956510 Cicer arietinum
Ca_05906 2.0kb upstream 2.0kb upstream 2000 false Ca6: 3954511-3956510 Cicer arietinum
Ca_05906 2.0kb downstream 2.0kb downstream 5317 true Ca6: 3949194-3954510 Cicer arietinum
Ca_05906 2.0kb downstream 2.0kb downstream 2000 false Ca6: 3949194-3951193 Cicer arietinum
Ca_05906 5.0kb upstream 5.0kb upstream 8317 true Ca6: 3951194-3959510 Cicer arietinum
Ca_05906 5.0kb upstream 5.0kb upstream 5000 false Ca6: 3954511-3959510 Cicer arietinum
Ca_05906 5.0kb downstream 5.0kb downstream 8317 true Ca6: 3946194-3954510 Cicer arietinum
Ca_05906 5.0kb downstream 5.0kb downstream 5000 false Ca6: 3946194-3951193 Cicer arietinum
Ca_05906 10.0kb upstream 10.0kb upstream 13317 true Ca6: 3951194-3964510 Cicer arietinum
Ca_05906 10.0kb upstream 10.0kb upstream 10000 false Ca6: 3954511-3964510 Cicer arietinum
Ca_05906 10.0kb downstream 10.0kb downstream 13317 true Ca6: 3941194-3954510 Cicer arietinum
Ca_05906 10.0kb downstream 10.0kb downstream 10000 false Ca6: 3941194-3951193 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307206 5265 Fabidae View MSA
124074798 5270 Rosid View MSA
123738885 5271 Pentapetalae View MSA
122790023 5272 Eudicot View MSA
122045893 5273 Angiosperm View MSA
121347200 5274 Embryophyte View MSA
123425101 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain