Gene : Ca_06546 C. arietinum v1.0
Defline:  (1 of 324) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1757
Name:  ? Ca_06546 Secondary Identifier:  ? PAC:40136179
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_06546 0.5kb upstream 0.5kb upstream 3768 true Ca6: 19404501-19408268 Cicer arietinum
Ca_06546 0.5kb upstream 0.5kb upstream 500 false Ca6: 19404501-19405000 Cicer arietinum
Ca_06546 0.5kb downstream 0.5kb downstream 3768 true Ca6: 19405001-19408768 Cicer arietinum
Ca_06546 0.5kb downstream 0.5kb downstream 500 false Ca6: 19408269-19408768 Cicer arietinum
Ca_06546 1.0kb upstream 1.0kb upstream 4268 true Ca6: 19404001-19408268 Cicer arietinum
Ca_06546 1.0kb upstream 1.0kb upstream 1000 false Ca6: 19404001-19405000 Cicer arietinum
Ca_06546 1.0kb downstream 1.0kb downstream 4268 true Ca6: 19405001-19409268 Cicer arietinum
Ca_06546 1.0kb downstream 1.0kb downstream 1000 false Ca6: 19408269-19409268 Cicer arietinum
Ca_06546 2.0kb upstream 2.0kb upstream 5268 true Ca6: 19403001-19408268 Cicer arietinum
Ca_06546 2.0kb upstream 2.0kb upstream 2000 false Ca6: 19403001-19405000 Cicer arietinum
Ca_06546 2.0kb downstream 2.0kb downstream 5268 true Ca6: 19405001-19410268 Cicer arietinum
Ca_06546 2.0kb downstream 2.0kb downstream 2000 false Ca6: 19408269-19410268 Cicer arietinum
Ca_06546 5.0kb upstream 5.0kb upstream 8268 true Ca6: 19400001-19408268 Cicer arietinum
Ca_06546 5.0kb upstream 5.0kb upstream 5000 false Ca6: 19400001-19405000 Cicer arietinum
Ca_06546 5.0kb downstream 5.0kb downstream 8268 true Ca6: 19405001-19413268 Cicer arietinum
Ca_06546 5.0kb downstream 5.0kb downstream 5000 false Ca6: 19408269-19413268 Cicer arietinum
Ca_06546 10.0kb upstream 10.0kb upstream 13268 true Ca6: 19395001-19408268 Cicer arietinum
Ca_06546 10.0kb upstream 10.0kb upstream 10000 false Ca6: 19395001-19405000 Cicer arietinum
Ca_06546 10.0kb downstream 10.0kb downstream 13268 true Ca6: 19405001-19418268 Cicer arietinum
Ca_06546 10.0kb downstream 10.0kb downstream 10000 false Ca6: 19408269-19418268 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311034 5265 Fabidae View MSA
124065193 5270 Rosid View MSA
123739429 5271 Pentapetalae View MSA
122786943 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain