Gene : Ca_06547 C. arietinum v1.0
Defline:  (1 of 2) K01184 - polygalacturonase (E3.2.1.15) Genomic Order:  1758
Name:  ? Ca_06547 Secondary Identifier:  ? PAC:40136850
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum PWY-1081 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_06547 0.5kb upstream 0.5kb upstream 2380 true Ca6: 19415726-19418105 Cicer arietinum
Ca_06547 0.5kb upstream 0.5kb upstream 500 false Ca6: 19415726-19416225 Cicer arietinum
Ca_06547 0.5kb downstream 0.5kb downstream 2380 true Ca6: 19416226-19418605 Cicer arietinum
Ca_06547 0.5kb downstream 0.5kb downstream 500 false Ca6: 19418106-19418605 Cicer arietinum
Ca_06547 1.0kb upstream 1.0kb upstream 2880 true Ca6: 19415226-19418105 Cicer arietinum
Ca_06547 1.0kb upstream 1.0kb upstream 1000 false Ca6: 19415226-19416225 Cicer arietinum
Ca_06547 1.0kb downstream 1.0kb downstream 2880 true Ca6: 19416226-19419105 Cicer arietinum
Ca_06547 1.0kb downstream 1.0kb downstream 1000 false Ca6: 19418106-19419105 Cicer arietinum
Ca_06547 2.0kb upstream 2.0kb upstream 3880 true Ca6: 19414226-19418105 Cicer arietinum
Ca_06547 2.0kb upstream 2.0kb upstream 2000 false Ca6: 19414226-19416225 Cicer arietinum
Ca_06547 2.0kb downstream 2.0kb downstream 3880 true Ca6: 19416226-19420105 Cicer arietinum
Ca_06547 2.0kb downstream 2.0kb downstream 2000 false Ca6: 19418106-19420105 Cicer arietinum
Ca_06547 5.0kb upstream 5.0kb upstream 6880 true Ca6: 19411226-19418105 Cicer arietinum
Ca_06547 5.0kb upstream 5.0kb upstream 5000 false Ca6: 19411226-19416225 Cicer arietinum
Ca_06547 5.0kb downstream 5.0kb downstream 6880 true Ca6: 19416226-19423105 Cicer arietinum
Ca_06547 5.0kb downstream 5.0kb downstream 5000 false Ca6: 19418106-19423105 Cicer arietinum
Ca_06547 10.0kb upstream 10.0kb upstream 11880 true Ca6: 19406226-19418105 Cicer arietinum
Ca_06547 10.0kb upstream 10.0kb upstream 10000 false Ca6: 19406226-19416225 Cicer arietinum
Ca_06547 10.0kb downstream 10.0kb downstream 11880 true Ca6: 19416226-19428105 Cicer arietinum
Ca_06547 10.0kb downstream 10.0kb downstream 10000 false Ca6: 19418106-19428105 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314468 5265 Fabidae View MSA
124060937 5270 Rosid View MSA
123747300 5271 Pentapetalae View MSA
122794998 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain