Gene : Ca_17340 C. arietinum v1.0
Defline:  (1 of 4) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Genomic Order:  1943
Name:  ? Ca_17340 Secondary Identifier:  ? PAC:40151959
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_17340 0.5kb upstream 0.5kb upstream 2639 true Ca1: 19358486-19361124 Cicer arietinum
Ca_17340 0.5kb upstream 0.5kb upstream 500 false Ca1: 19360625-19361124 Cicer arietinum
Ca_17340 0.5kb downstream 0.5kb downstream 2639 true Ca1: 19357986-19360624 Cicer arietinum
Ca_17340 0.5kb downstream 0.5kb downstream 500 false Ca1: 19357986-19358485 Cicer arietinum
Ca_17340 1.0kb upstream 1.0kb upstream 3139 true Ca1: 19358486-19361624 Cicer arietinum
Ca_17340 1.0kb upstream 1.0kb upstream 1000 false Ca1: 19360625-19361624 Cicer arietinum
Ca_17340 1.0kb downstream 1.0kb downstream 3139 true Ca1: 19357486-19360624 Cicer arietinum
Ca_17340 1.0kb downstream 1.0kb downstream 1000 false Ca1: 19357486-19358485 Cicer arietinum
Ca_17340 2.0kb upstream 2.0kb upstream 4139 true Ca1: 19358486-19362624 Cicer arietinum
Ca_17340 2.0kb upstream 2.0kb upstream 2000 false Ca1: 19360625-19362624 Cicer arietinum
Ca_17340 2.0kb downstream 2.0kb downstream 4139 true Ca1: 19356486-19360624 Cicer arietinum
Ca_17340 2.0kb downstream 2.0kb downstream 2000 false Ca1: 19356486-19358485 Cicer arietinum
Ca_17340 5.0kb upstream 5.0kb upstream 7139 true Ca1: 19358486-19365624 Cicer arietinum
Ca_17340 5.0kb upstream 5.0kb upstream 5000 false Ca1: 19360625-19365624 Cicer arietinum
Ca_17340 5.0kb downstream 5.0kb downstream 7139 true Ca1: 19353486-19360624 Cicer arietinum
Ca_17340 5.0kb downstream 5.0kb downstream 5000 false Ca1: 19353486-19358485 Cicer arietinum
Ca_17340 10.0kb upstream 10.0kb upstream 12139 true Ca1: 19358486-19370624 Cicer arietinum
Ca_17340 10.0kb upstream 10.0kb upstream 10000 false Ca1: 19360625-19370624 Cicer arietinum
Ca_17340 10.0kb downstream 10.0kb downstream 12139 true Ca1: 19348486-19360624 Cicer arietinum
Ca_17340 10.0kb downstream 10.0kb downstream 10000 false Ca1: 19348486-19358485 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309903 5265 Fabidae View MSA
124065938 5270 Rosid View MSA
123738887 5271 Pentapetalae View MSA
122785902 5272 Eudicot View MSA
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain