PhytoMine: Gene Ca_08496 C. arietinum v1.0

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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier	Organism Name	Analysis Method	Analysis Status
Carietinum PWY-6543	Cicer arietinum	pathologic
Carietinum PWY-6612	Cicer arietinum	pathologic

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
Ca_08496 0.5kb upstream	0.5kb	upstream	15266	true	Ca4: 10292726-10307991	Cicer arietinum
Ca_08496 0.5kb upstream	0.5kb	upstream	500	false	Ca4: 10292726-10293225	Cicer arietinum
Ca_08496 0.5kb downstream	0.5kb	downstream	15266	true	Ca4: 10293226-10308491	Cicer arietinum
Ca_08496 0.5kb downstream	0.5kb	downstream	500	false	Ca4: 10307992-10308491	Cicer arietinum
Ca_08496 1.0kb upstream	1.0kb	upstream	15766	true	Ca4: 10292226-10307991	Cicer arietinum
Ca_08496 1.0kb upstream	1.0kb	upstream	1000	false	Ca4: 10292226-10293225	Cicer arietinum
Ca_08496 1.0kb downstream	1.0kb	downstream	15766	true	Ca4: 10293226-10308991	Cicer arietinum
Ca_08496 1.0kb downstream	1.0kb	downstream	1000	false	Ca4: 10307992-10308991	Cicer arietinum
Ca_08496 2.0kb upstream	2.0kb	upstream	16766	true	Ca4: 10291226-10307991	Cicer arietinum
Ca_08496 2.0kb upstream	2.0kb	upstream	2000	false	Ca4: 10291226-10293225	Cicer arietinum
Ca_08496 2.0kb downstream	2.0kb	downstream	16766	true	Ca4: 10293226-10309991	Cicer arietinum
Ca_08496 2.0kb downstream	2.0kb	downstream	2000	false	Ca4: 10307992-10309991	Cicer arietinum
Ca_08496 5.0kb upstream	5.0kb	upstream	19766	true	Ca4: 10288226-10307991	Cicer arietinum
Ca_08496 5.0kb upstream	5.0kb	upstream	5000	false	Ca4: 10288226-10293225	Cicer arietinum
Ca_08496 5.0kb downstream	5.0kb	downstream	19766	true	Ca4: 10293226-10312991	Cicer arietinum
Ca_08496 5.0kb downstream	5.0kb	downstream	5000	false	Ca4: 10307992-10312991	Cicer arietinum
Ca_08496 10.0kb upstream	10.0kb	upstream	24766	true	Ca4: 10283226-10307991	Cicer arietinum
Ca_08496 10.0kb upstream	10.0kb	upstream	10000	false	Ca4: 10283226-10293225	Cicer arietinum
Ca_08496 10.0kb downstream	10.0kb	downstream	24766	true	Ca4: 10293226-10317991	Cicer arietinum
Ca_08496 10.0kb downstream	10.0kb	downstream	10000	false	Ca4: 10307992-10317991	Cicer arietinum

7 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
122302827	5265	Fabidae	View MSA
124072524	5270	Rosid	View MSA
123738750	5271	Pentapetalae	View MSA
122789996	5272	Eudicot	View MSA
122041819	5273	Angiosperm	View MSA
121349343	5274	Embryophyte	View MSA
123425375	5275	Viridiplantae	View MSA

Defline:	(1 of 1) 2.6.1.85 - Aminodeoxychorismate synthase / ADC synthase	Genomic Order:	998
Name:	Ca_08496	Secondary Identifier:	PAC:40144795

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Message:	---- Current page: ---- /phytomine/report.do?id=1111209966 ---- Current query: ---- <query name="" model="genomic" view="CDS.gene.primaryIdentifier CDS.gene.briefDescription CDS.gene.organism.shortName CDS.gene.symbol CDS.gene.length CDS.gene.chromosome.primaryIdentifier CDS.gene.chromosomeLocation.start CDS.gene.chromosomeLocation.end" longDescription=""><join path="CDS.gene.organism" style="OUTER"/><join path="CDS.gene.chromosome" style="OUTER"/><join path="CDS.gene.chromosomeLocation" style="OUTER"/><constraint path="CDS.id" op="=" value="115745463"/></query>

Gene : Ca_08496 C. arietinum v1.0

Phytozome Links

Links to other Mines

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

Other

0 Synonyms

20 Flanking Regions

7 Protein Familys

0 Rna Seq Expressions

0 Strain