Gene : Ca_09729 C. arietinum v1.0
Defline:  (1 of 8) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  2117
Name:  ? Ca_09729 Secondary Identifier:  ? PAC:40157509
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_09729 0.5kb upstream 0.5kb upstream 716 true Ca2: 35600126-35600841 Cicer arietinum
Ca_09729 0.5kb upstream 0.5kb upstream 500 false Ca2: 35600126-35600625 Cicer arietinum
Ca_09729 0.5kb downstream 0.5kb downstream 716 true Ca2: 35600626-35601341 Cicer arietinum
Ca_09729 0.5kb downstream 0.5kb downstream 500 false Ca2: 35600842-35601341 Cicer arietinum
Ca_09729 1.0kb upstream 1.0kb upstream 1216 true Ca2: 35599626-35600841 Cicer arietinum
Ca_09729 1.0kb upstream 1.0kb upstream 1000 false Ca2: 35599626-35600625 Cicer arietinum
Ca_09729 1.0kb downstream 1.0kb downstream 1216 true Ca2: 35600626-35601841 Cicer arietinum
Ca_09729 1.0kb downstream 1.0kb downstream 1000 false Ca2: 35600842-35601841 Cicer arietinum
Ca_09729 2.0kb upstream 2.0kb upstream 2216 true Ca2: 35598626-35600841 Cicer arietinum
Ca_09729 2.0kb upstream 2.0kb upstream 2000 false Ca2: 35598626-35600625 Cicer arietinum
Ca_09729 2.0kb downstream 2.0kb downstream 2216 true Ca2: 35600626-35602841 Cicer arietinum
Ca_09729 2.0kb downstream 2.0kb downstream 2000 false Ca2: 35600842-35602841 Cicer arietinum
Ca_09729 5.0kb upstream 5.0kb upstream 5216 true Ca2: 35595626-35600841 Cicer arietinum
Ca_09729 5.0kb upstream 5.0kb upstream 5000 false Ca2: 35595626-35600625 Cicer arietinum
Ca_09729 5.0kb downstream 5.0kb downstream 5216 true Ca2: 35600626-35605841 Cicer arietinum
Ca_09729 5.0kb downstream 5.0kb downstream 5000 false Ca2: 35600842-35605841 Cicer arietinum
Ca_09729 10.0kb upstream 10.0kb upstream 10216 true Ca2: 35590626-35600841 Cicer arietinum
Ca_09729 10.0kb upstream 10.0kb upstream 10000 false Ca2: 35590626-35600625 Cicer arietinum
Ca_09729 10.0kb downstream 10.0kb downstream 10216 true Ca2: 35600626-35610841 Cicer arietinum
Ca_09729 10.0kb downstream 10.0kb downstream 10000 false Ca2: 35600842-35610841 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312019 5265 Fabidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain