Gene : Ca_03559 C. arietinum v1.0
Defline:  (1 of 1) PTHR10742:SF294 - PROTOPORPHYRINOGEN OXIDASE 1, CHLOROPLASTIC Genomic Order:  665
Name:  ? Ca_03559 Secondary Identifier:  ? PAC:40145446
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum CHLOROPHYLL-SYN Cicer arietinum pathologic  
Carietinum HEME-BIOSYNTHESIS-II Cicer arietinum pathologic  
Carietinum PWY-5918 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_03559 0.5kb upstream 0.5kb upstream 5899 true Ca4: 6811577-6817475 Cicer arietinum
Ca_03559 0.5kb upstream 0.5kb upstream 500 false Ca4: 6811577-6812076 Cicer arietinum
Ca_03559 0.5kb downstream 0.5kb downstream 5899 true Ca4: 6812077-6817975 Cicer arietinum
Ca_03559 0.5kb downstream 0.5kb downstream 500 false Ca4: 6817476-6817975 Cicer arietinum
Ca_03559 1.0kb upstream 1.0kb upstream 6399 true Ca4: 6811077-6817475 Cicer arietinum
Ca_03559 1.0kb upstream 1.0kb upstream 1000 false Ca4: 6811077-6812076 Cicer arietinum
Ca_03559 1.0kb downstream 1.0kb downstream 6399 true Ca4: 6812077-6818475 Cicer arietinum
Ca_03559 1.0kb downstream 1.0kb downstream 1000 false Ca4: 6817476-6818475 Cicer arietinum
Ca_03559 2.0kb upstream 2.0kb upstream 7399 true Ca4: 6810077-6817475 Cicer arietinum
Ca_03559 2.0kb upstream 2.0kb upstream 2000 false Ca4: 6810077-6812076 Cicer arietinum
Ca_03559 2.0kb downstream 2.0kb downstream 7399 true Ca4: 6812077-6819475 Cicer arietinum
Ca_03559 2.0kb downstream 2.0kb downstream 2000 false Ca4: 6817476-6819475 Cicer arietinum
Ca_03559 5.0kb upstream 5.0kb upstream 10399 true Ca4: 6807077-6817475 Cicer arietinum
Ca_03559 5.0kb upstream 5.0kb upstream 5000 false Ca4: 6807077-6812076 Cicer arietinum
Ca_03559 5.0kb downstream 5.0kb downstream 10399 true Ca4: 6812077-6822475 Cicer arietinum
Ca_03559 5.0kb downstream 5.0kb downstream 5000 false Ca4: 6817476-6822475 Cicer arietinum
Ca_03559 10.0kb upstream 10.0kb upstream 15399 true Ca4: 6802077-6817475 Cicer arietinum
Ca_03559 10.0kb upstream 10.0kb upstream 10000 false Ca4: 6802077-6812076 Cicer arietinum
Ca_03559 10.0kb downstream 10.0kb downstream 15399 true Ca4: 6812077-6827475 Cicer arietinum
Ca_03559 10.0kb downstream 10.0kb downstream 10000 false Ca4: 6817476-6827475 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305457 5265 Fabidae View MSA
124065931 5270 Rosid View MSA
123747490 5271 Pentapetalae View MSA
122787686 5272 Eudicot View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain