Gene : Ca_12583 C. arietinum v1.0
Defline:  (1 of 1) PTHR11822:SF5 - ISOCITRATE DEHYDROGENASE [NADP], CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  138
Name:  ? Ca_12583 Secondary Identifier:  ? PAC:40158532
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum PWY-6549 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_12583 0.5kb upstream 0.5kb upstream 4752 true Ca2: 1969904-1974655 Cicer arietinum
Ca_12583 0.5kb upstream 0.5kb upstream 500 false Ca2: 1969904-1970403 Cicer arietinum
Ca_12583 0.5kb downstream 0.5kb downstream 4752 true Ca2: 1970404-1975155 Cicer arietinum
Ca_12583 0.5kb downstream 0.5kb downstream 500 false Ca2: 1974656-1975155 Cicer arietinum
Ca_12583 1.0kb upstream 1.0kb upstream 5252 true Ca2: 1969404-1974655 Cicer arietinum
Ca_12583 1.0kb upstream 1.0kb upstream 1000 false Ca2: 1969404-1970403 Cicer arietinum
Ca_12583 1.0kb downstream 1.0kb downstream 5252 true Ca2: 1970404-1975655 Cicer arietinum
Ca_12583 1.0kb downstream 1.0kb downstream 1000 false Ca2: 1974656-1975655 Cicer arietinum
Ca_12583 2.0kb upstream 2.0kb upstream 6252 true Ca2: 1968404-1974655 Cicer arietinum
Ca_12583 2.0kb upstream 2.0kb upstream 2000 false Ca2: 1968404-1970403 Cicer arietinum
Ca_12583 2.0kb downstream 2.0kb downstream 6252 true Ca2: 1970404-1976655 Cicer arietinum
Ca_12583 2.0kb downstream 2.0kb downstream 2000 false Ca2: 1974656-1976655 Cicer arietinum
Ca_12583 5.0kb upstream 5.0kb upstream 9252 true Ca2: 1965404-1974655 Cicer arietinum
Ca_12583 5.0kb upstream 5.0kb upstream 5000 false Ca2: 1965404-1970403 Cicer arietinum
Ca_12583 5.0kb downstream 5.0kb downstream 9252 true Ca2: 1970404-1979655 Cicer arietinum
Ca_12583 5.0kb downstream 5.0kb downstream 5000 false Ca2: 1974656-1979655 Cicer arietinum
Ca_12583 10.0kb upstream 10.0kb upstream 14252 true Ca2: 1960404-1974655 Cicer arietinum
Ca_12583 10.0kb upstream 10.0kb upstream 10000 false Ca2: 1960404-1970403 Cicer arietinum
Ca_12583 10.0kb downstream 10.0kb downstream 14252 true Ca2: 1970404-1984655 Cicer arietinum
Ca_12583 10.0kb downstream 10.0kb downstream 10000 false Ca2: 1974656-1984655 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041513 5273 Angiosperm View MSA
122304433 5265 Fabidae View MSA
124066348 5270 Rosid View MSA
123740516 5271 Pentapetalae View MSA
122791819 5272 Eudicot View MSA
121349846 5274 Embryophyte View MSA
123426624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain