Gene : Ca_14394 C. arietinum v1.0
Defline:  (1 of 1) PTHR31480//PTHR31480:SF2 - FAMILY NOT NAMED // PHYTOENE SYNTHASE, CHLOROPLASTIC Genomic Order:  1492
Name:  ? Ca_14394 Secondary Identifier:  ? PAC:40158543
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum CAROTENOID-PWY Cicer arietinum pathologic  
Carietinum PWY-6475 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_14394 0.5kb upstream 0.5kb upstream 3637 true Ca2: 28083513-28087149 Cicer arietinum
Ca_14394 0.5kb upstream 0.5kb upstream 500 false Ca2: 28086650-28087149 Cicer arietinum
Ca_14394 0.5kb downstream 0.5kb downstream 3637 true Ca2: 28083013-28086649 Cicer arietinum
Ca_14394 0.5kb downstream 0.5kb downstream 500 false Ca2: 28083013-28083512 Cicer arietinum
Ca_14394 1.0kb upstream 1.0kb upstream 4137 true Ca2: 28083513-28087649 Cicer arietinum
Ca_14394 1.0kb upstream 1.0kb upstream 1000 false Ca2: 28086650-28087649 Cicer arietinum
Ca_14394 1.0kb downstream 1.0kb downstream 4137 true Ca2: 28082513-28086649 Cicer arietinum
Ca_14394 1.0kb downstream 1.0kb downstream 1000 false Ca2: 28082513-28083512 Cicer arietinum
Ca_14394 2.0kb upstream 2.0kb upstream 5137 true Ca2: 28083513-28088649 Cicer arietinum
Ca_14394 2.0kb upstream 2.0kb upstream 2000 false Ca2: 28086650-28088649 Cicer arietinum
Ca_14394 2.0kb downstream 2.0kb downstream 5137 true Ca2: 28081513-28086649 Cicer arietinum
Ca_14394 2.0kb downstream 2.0kb downstream 2000 false Ca2: 28081513-28083512 Cicer arietinum
Ca_14394 5.0kb upstream 5.0kb upstream 8137 true Ca2: 28083513-28091649 Cicer arietinum
Ca_14394 5.0kb upstream 5.0kb upstream 5000 false Ca2: 28086650-28091649 Cicer arietinum
Ca_14394 5.0kb downstream 5.0kb downstream 8137 true Ca2: 28078513-28086649 Cicer arietinum
Ca_14394 5.0kb downstream 5.0kb downstream 5000 false Ca2: 28078513-28083512 Cicer arietinum
Ca_14394 10.0kb upstream 10.0kb upstream 13137 true Ca2: 28083513-28096649 Cicer arietinum
Ca_14394 10.0kb upstream 10.0kb upstream 10000 false Ca2: 28086650-28096649 Cicer arietinum
Ca_14394 10.0kb downstream 10.0kb downstream 13137 true Ca2: 28073513-28086649 Cicer arietinum
Ca_14394 10.0kb downstream 10.0kb downstream 10000 false Ca2: 28073513-28083512 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122301582 5265 Fabidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain