Gene : Zm00001d000417 Z. mays RefGen_V4
Defline:  (1 of 7) 1.10.3.9 - Photosystem II Genomic Order:  1
Name:  ? Zm00001d000417 Secondary Identifier:  ? PAC:40219371
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Zmays PHOTOALL-PWY Zea mays pathologic  
Zmays PWY-101 Zea mays pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00001d000417 0.5kb upstream 0.5kb upstream 1562 true B73V4_ctg121: 20918-22479 Zea mays
Zm00001d000417 0.5kb upstream 0.5kb upstream 500 false B73V4_ctg121: 21980-22479 Zea mays
Zm00001d000417 0.5kb downstream 0.5kb downstream 1562 true B73V4_ctg121: 20418-21979 Zea mays
Zm00001d000417 0.5kb downstream 0.5kb downstream 500 false B73V4_ctg121: 20418-20917 Zea mays
Zm00001d000417 1.0kb upstream 1.0kb upstream 2062 true B73V4_ctg121: 20918-22979 Zea mays
Zm00001d000417 1.0kb upstream 1.0kb upstream 1000 false B73V4_ctg121: 21980-22979 Zea mays
Zm00001d000417 1.0kb downstream 1.0kb downstream 2062 true B73V4_ctg121: 19918-21979 Zea mays
Zm00001d000417 1.0kb downstream 1.0kb downstream 1000 false B73V4_ctg121: 19918-20917 Zea mays
Zm00001d000417 2.0kb upstream 2.0kb upstream 3062 true B73V4_ctg121: 20918-23979 Zea mays
Zm00001d000417 2.0kb upstream 2.0kb upstream 2000 false B73V4_ctg121: 21980-23979 Zea mays
Zm00001d000417 2.0kb downstream 2.0kb downstream 3062 true B73V4_ctg121: 18918-21979 Zea mays
Zm00001d000417 2.0kb downstream 2.0kb downstream 2000 false B73V4_ctg121: 18918-20917 Zea mays
Zm00001d000417 5.0kb upstream 5.0kb upstream 6062 true B73V4_ctg121: 20918-26979 Zea mays
Zm00001d000417 5.0kb upstream 5.0kb upstream 5000 false B73V4_ctg121: 21980-26979 Zea mays
Zm00001d000417 5.0kb downstream 5.0kb downstream 6062 true B73V4_ctg121: 15918-21979 Zea mays
Zm00001d000417 5.0kb downstream 5.0kb downstream 5000 false B73V4_ctg121: 15918-20917 Zea mays
Zm00001d000417 10.0kb upstream 10.0kb upstream 11062 true B73V4_ctg121: 20918-31979 Zea mays
Zm00001d000417 10.0kb upstream 10.0kb upstream 10000 false B73V4_ctg121: 21980-31979 Zea mays
Zm00001d000417 10.0kb downstream 10.0kb downstream 11062 true B73V4_ctg121: 10918-21979 Zea mays
Zm00001d000417 10.0kb downstream 10.0kb downstream 10000 false B73V4_ctg121: 10918-20917 Zea mays

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193421 5267 Panicoideae View MSA
124586576 5269 Grass View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain