Gene : HanXRQChr01g0005541 H. annuus r1.2
Defline:  (1 of 2) K04718 - sphingosine kinase (SPHK) Genomic Order:  512
Name:  ? HanXRQChr01g0005541 Secondary Identifier:  ? PAC:40323937
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PWY-5129 Helianthus annuus pathologic  
Hannuus PWY-6483 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr01g0005541 0.5kb upstream 0.5kb upstream 8443 true HanXRQChr01: 38440766-38449208 Helianthus annuus
HanXRQChr01g0005541 0.5kb upstream 0.5kb upstream 500 false HanXRQChr01: 38448709-38449208 Helianthus annuus
HanXRQChr01g0005541 0.5kb downstream 0.5kb downstream 8443 true HanXRQChr01: 38440266-38448708 Helianthus annuus
HanXRQChr01g0005541 0.5kb downstream 0.5kb downstream 500 false HanXRQChr01: 38440266-38440765 Helianthus annuus
HanXRQChr01g0005541 1.0kb upstream 1.0kb upstream 8943 true HanXRQChr01: 38440766-38449708 Helianthus annuus
HanXRQChr01g0005541 1.0kb upstream 1.0kb upstream 1000 false HanXRQChr01: 38448709-38449708 Helianthus annuus
HanXRQChr01g0005541 1.0kb downstream 1.0kb downstream 8943 true HanXRQChr01: 38439766-38448708 Helianthus annuus
HanXRQChr01g0005541 1.0kb downstream 1.0kb downstream 1000 false HanXRQChr01: 38439766-38440765 Helianthus annuus
HanXRQChr01g0005541 2.0kb upstream 2.0kb upstream 9943 true HanXRQChr01: 38440766-38450708 Helianthus annuus
HanXRQChr01g0005541 2.0kb upstream 2.0kb upstream 2000 false HanXRQChr01: 38448709-38450708 Helianthus annuus
HanXRQChr01g0005541 2.0kb downstream 2.0kb downstream 9943 true HanXRQChr01: 38438766-38448708 Helianthus annuus
HanXRQChr01g0005541 2.0kb downstream 2.0kb downstream 2000 false HanXRQChr01: 38438766-38440765 Helianthus annuus
HanXRQChr01g0005541 5.0kb upstream 5.0kb upstream 12943 true HanXRQChr01: 38440766-38453708 Helianthus annuus
HanXRQChr01g0005541 5.0kb upstream 5.0kb upstream 5000 false HanXRQChr01: 38448709-38453708 Helianthus annuus
HanXRQChr01g0005541 5.0kb downstream 5.0kb downstream 12943 true HanXRQChr01: 38435766-38448708 Helianthus annuus
HanXRQChr01g0005541 5.0kb downstream 5.0kb downstream 5000 false HanXRQChr01: 38435766-38440765 Helianthus annuus
HanXRQChr01g0005541 10.0kb upstream 10.0kb upstream 17943 true HanXRQChr01: 38440766-38458708 Helianthus annuus
HanXRQChr01g0005541 10.0kb upstream 10.0kb upstream 10000 false HanXRQChr01: 38448709-38458708 Helianthus annuus
HanXRQChr01g0005541 10.0kb downstream 10.0kb downstream 17943 true HanXRQChr01: 38430766-38448708 Helianthus annuus
HanXRQChr01g0005541 10.0kb downstream 10.0kb downstream 10000 false HanXRQChr01: 38430766-38440765 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481074 5263 Asterids View MSA
123737091 5271 Pentapetalae View MSA
122793625 5272 Eudicot View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain