Gene : HanXRQChr03g0075021 H. annuus r1.2
Defline:  (1 of 11) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1350
Name:  ? HanXRQChr03g0075021 Secondary Identifier:  ? PAC:40333230
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr03g0075021 0.5kb upstream 0.5kb upstream 5082   true HanXRQChr03: 104204509-104209590 Helianthus annuus
HanXRQChr03g0075021 0.5kb upstream 0.5kb upstream 500   false HanXRQChr03: 104209091-104209590 Helianthus annuus
HanXRQChr03g0075021 0.5kb downstream 0.5kb downstream 5082   true HanXRQChr03: 104204009-104209090 Helianthus annuus
HanXRQChr03g0075021 0.5kb downstream 0.5kb downstream 500   false HanXRQChr03: 104204009-104204508 Helianthus annuus
HanXRQChr03g0075021 1.0kb upstream 1.0kb upstream 5582   true HanXRQChr03: 104204509-104210090 Helianthus annuus
HanXRQChr03g0075021 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr03: 104209091-104210090 Helianthus annuus
HanXRQChr03g0075021 1.0kb downstream 1.0kb downstream 5582   true HanXRQChr03: 104203509-104209090 Helianthus annuus
HanXRQChr03g0075021 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr03: 104203509-104204508 Helianthus annuus
HanXRQChr03g0075021 2.0kb upstream 2.0kb upstream 6582   true HanXRQChr03: 104204509-104211090 Helianthus annuus
HanXRQChr03g0075021 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr03: 104209091-104211090 Helianthus annuus
HanXRQChr03g0075021 2.0kb downstream 2.0kb downstream 6582   true HanXRQChr03: 104202509-104209090 Helianthus annuus
HanXRQChr03g0075021 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr03: 104202509-104204508 Helianthus annuus
HanXRQChr03g0075021 5.0kb upstream 5.0kb upstream 9582   true HanXRQChr03: 104204509-104214090 Helianthus annuus
HanXRQChr03g0075021 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr03: 104209091-104214090 Helianthus annuus
HanXRQChr03g0075021 5.0kb downstream 5.0kb downstream 9582   true HanXRQChr03: 104199509-104209090 Helianthus annuus
HanXRQChr03g0075021 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr03: 104199509-104204508 Helianthus annuus
HanXRQChr03g0075021 10.0kb upstream 10.0kb upstream 14582   true HanXRQChr03: 104204509-104219090 Helianthus annuus
HanXRQChr03g0075021 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr03: 104209091-104219090 Helianthus annuus
HanXRQChr03g0075021 10.0kb downstream 10.0kb downstream 14582   true HanXRQChr03: 104194509-104209090 Helianthus annuus
HanXRQChr03g0075021 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr03: 104194509-104204508 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479350 5263 Asterids View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain