Gene : HanXRQChr10g0299311 H. annuus r1.2
Defline:  (1 of 9) K02704 - photosystem II CP47 chlorophyll apoprotein (psbB) Genomic Order:  1960
Name:  ? HanXRQChr10g0299311 Secondary Identifier:  ? PAC:40295627
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PHOTOALL-PWY Helianthus annuus pathologic  
Hannuus PWY-101 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr10g0299311 0.5kb upstream 0.5kb upstream 2027   true HanXRQChr10: 145838989-145841015 Helianthus annuus
HanXRQChr10g0299311 0.5kb upstream 0.5kb upstream 500   false HanXRQChr10: 145838989-145839488 Helianthus annuus
HanXRQChr10g0299311 0.5kb downstream 0.5kb downstream 2027   true HanXRQChr10: 145839489-145841515 Helianthus annuus
HanXRQChr10g0299311 0.5kb downstream 0.5kb downstream 500   false HanXRQChr10: 145841016-145841515 Helianthus annuus
HanXRQChr10g0299311 1.0kb upstream 1.0kb upstream 2527   true HanXRQChr10: 145838489-145841015 Helianthus annuus
HanXRQChr10g0299311 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr10: 145838489-145839488 Helianthus annuus
HanXRQChr10g0299311 1.0kb downstream 1.0kb downstream 2527   true HanXRQChr10: 145839489-145842015 Helianthus annuus
HanXRQChr10g0299311 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr10: 145841016-145842015 Helianthus annuus
HanXRQChr10g0299311 2.0kb upstream 2.0kb upstream 3527   true HanXRQChr10: 145837489-145841015 Helianthus annuus
HanXRQChr10g0299311 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr10: 145837489-145839488 Helianthus annuus
HanXRQChr10g0299311 2.0kb downstream 2.0kb downstream 3527   true HanXRQChr10: 145839489-145843015 Helianthus annuus
HanXRQChr10g0299311 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr10: 145841016-145843015 Helianthus annuus
HanXRQChr10g0299311 5.0kb upstream 5.0kb upstream 6527   true HanXRQChr10: 145834489-145841015 Helianthus annuus
HanXRQChr10g0299311 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr10: 145834489-145839488 Helianthus annuus
HanXRQChr10g0299311 5.0kb downstream 5.0kb downstream 6527   true HanXRQChr10: 145839489-145846015 Helianthus annuus
HanXRQChr10g0299311 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr10: 145841016-145846015 Helianthus annuus
HanXRQChr10g0299311 10.0kb upstream 10.0kb upstream 11527   true HanXRQChr10: 145829489-145841015 Helianthus annuus
HanXRQChr10g0299311 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr10: 145829489-145839488 Helianthus annuus
HanXRQChr10g0299311 10.0kb downstream 10.0kb downstream 11527   true HanXRQChr10: 145839489-145851015 Helianthus annuus
HanXRQChr10g0299311 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr10: 145841016-145851015 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481691 5263 Asterids View MSA
123753691 5271 Pentapetalae View MSA
122787525 5272 Eudicot View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain