Gene : HanXRQChr03g0090571 H. annuus r1.2
Defline:  (1 of 5) PTHR13301:SF33 - CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 1 [UDP-FORMING] Genomic Order:  2760
Name:  ? HanXRQChr03g0090571 Secondary Identifier:  ? PAC:40334974
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PWY-1001 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr03g0090571 0.5kb upstream 0.5kb upstream 7668   true HanXRQChr03: 160185397-160193064 Helianthus annuus
HanXRQChr03g0090571 0.5kb upstream 0.5kb upstream 500   false HanXRQChr03: 160185397-160185896 Helianthus annuus
HanXRQChr03g0090571 0.5kb downstream 0.5kb downstream 7668   true HanXRQChr03: 160185897-160193564 Helianthus annuus
HanXRQChr03g0090571 0.5kb downstream 0.5kb downstream 500   false HanXRQChr03: 160193065-160193564 Helianthus annuus
HanXRQChr03g0090571 1.0kb upstream 1.0kb upstream 8168   true HanXRQChr03: 160184897-160193064 Helianthus annuus
HanXRQChr03g0090571 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr03: 160184897-160185896 Helianthus annuus
HanXRQChr03g0090571 1.0kb downstream 1.0kb downstream 8168   true HanXRQChr03: 160185897-160194064 Helianthus annuus
HanXRQChr03g0090571 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr03: 160193065-160194064 Helianthus annuus
HanXRQChr03g0090571 2.0kb upstream 2.0kb upstream 9168   true HanXRQChr03: 160183897-160193064 Helianthus annuus
HanXRQChr03g0090571 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr03: 160183897-160185896 Helianthus annuus
HanXRQChr03g0090571 2.0kb downstream 2.0kb downstream 9168   true HanXRQChr03: 160185897-160195064 Helianthus annuus
HanXRQChr03g0090571 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr03: 160193065-160195064 Helianthus annuus
HanXRQChr03g0090571 5.0kb upstream 5.0kb upstream 12168   true HanXRQChr03: 160180897-160193064 Helianthus annuus
HanXRQChr03g0090571 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr03: 160180897-160185896 Helianthus annuus
HanXRQChr03g0090571 5.0kb downstream 5.0kb downstream 12168   true HanXRQChr03: 160185897-160198064 Helianthus annuus
HanXRQChr03g0090571 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr03: 160193065-160198064 Helianthus annuus
HanXRQChr03g0090571 10.0kb upstream 10.0kb upstream 17168   true HanXRQChr03: 160175897-160193064 Helianthus annuus
HanXRQChr03g0090571 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr03: 160175897-160185896 Helianthus annuus
HanXRQChr03g0090571 10.0kb downstream 10.0kb downstream 17168   true HanXRQChr03: 160185897-160203064 Helianthus annuus
HanXRQChr03g0090571 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr03: 160193065-160203064 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468311 5263 Asterids View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain