Gene : HanXRQChr03g0087131 H. annuus r1.2
Defline:  (1 of 32) PTHR30128//PTHR30128:SF8 - OUTER MEMBRANE PROTEIN, OMPA-RELATED // PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1 Genomic Order:  2443
Name:  ? HanXRQChr03g0087131 Secondary Identifier:  ? PAC:40332968
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PHOTOALL-PWY Helianthus annuus pathologic  
Hannuus PWY-101 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr03g0087131 0.5kb upstream 0.5kb upstream 1109   true HanXRQChr03: 148727477-148728585 Helianthus annuus
HanXRQChr03g0087131 0.5kb upstream 0.5kb upstream 500   false HanXRQChr03: 148728086-148728585 Helianthus annuus
HanXRQChr03g0087131 0.5kb downstream 0.5kb downstream 1109   true HanXRQChr03: 148726977-148728085 Helianthus annuus
HanXRQChr03g0087131 0.5kb downstream 0.5kb downstream 500   false HanXRQChr03: 148726977-148727476 Helianthus annuus
HanXRQChr03g0087131 1.0kb upstream 1.0kb upstream 1609   true HanXRQChr03: 148727477-148729085 Helianthus annuus
HanXRQChr03g0087131 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr03: 148728086-148729085 Helianthus annuus
HanXRQChr03g0087131 1.0kb downstream 1.0kb downstream 1609   true HanXRQChr03: 148726477-148728085 Helianthus annuus
HanXRQChr03g0087131 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr03: 148726477-148727476 Helianthus annuus
HanXRQChr03g0087131 2.0kb upstream 2.0kb upstream 2609   true HanXRQChr03: 148727477-148730085 Helianthus annuus
HanXRQChr03g0087131 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr03: 148728086-148730085 Helianthus annuus
HanXRQChr03g0087131 2.0kb downstream 2.0kb downstream 2609   true HanXRQChr03: 148725477-148728085 Helianthus annuus
HanXRQChr03g0087131 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr03: 148725477-148727476 Helianthus annuus
HanXRQChr03g0087131 5.0kb upstream 5.0kb upstream 5609   true HanXRQChr03: 148727477-148733085 Helianthus annuus
HanXRQChr03g0087131 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr03: 148728086-148733085 Helianthus annuus
HanXRQChr03g0087131 5.0kb downstream 5.0kb downstream 5609   true HanXRQChr03: 148722477-148728085 Helianthus annuus
HanXRQChr03g0087131 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr03: 148722477-148727476 Helianthus annuus
HanXRQChr03g0087131 10.0kb upstream 10.0kb upstream 10609   true HanXRQChr03: 148727477-148738085 Helianthus annuus
HanXRQChr03g0087131 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr03: 148728086-148738085 Helianthus annuus
HanXRQChr03g0087131 10.0kb downstream 10.0kb downstream 10609   true HanXRQChr03: 148717477-148728085 Helianthus annuus
HanXRQChr03g0087131 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr03: 148717477-148727476 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029302 5273 Angiosperm View MSA
121433334 5263 Asterids Singleton cluster - no MSA
123753251 5271 Pentapetalae View MSA
122775013 5272 Eudicot View MSA
121350541 5274 Embryophyte View MSA
123381782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain