Gene : HanXRQChr04g0117811 H. annuus r1.2
Defline:  (1 of 1) PTHR21089//PTHR21089:SF7 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  2142
Name:  ? HanXRQChr04g0117811 Secondary Identifier:  ? PAC:40304440
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus ARO-PWY Helianthus annuus pathologic  
Hannuus PWY-6163 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr04g0117811 0.5kb upstream 0.5kb upstream 12176   true HanXRQChr04: 143260762-143272937 Helianthus annuus
HanXRQChr04g0117811 0.5kb upstream 0.5kb upstream 500   false HanXRQChr04: 143260762-143261261 Helianthus annuus
HanXRQChr04g0117811 0.5kb downstream 0.5kb downstream 12176   true HanXRQChr04: 143261262-143273437 Helianthus annuus
HanXRQChr04g0117811 0.5kb downstream 0.5kb downstream 500   false HanXRQChr04: 143272938-143273437 Helianthus annuus
HanXRQChr04g0117811 1.0kb upstream 1.0kb upstream 12676   true HanXRQChr04: 143260262-143272937 Helianthus annuus
HanXRQChr04g0117811 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr04: 143260262-143261261 Helianthus annuus
HanXRQChr04g0117811 1.0kb downstream 1.0kb downstream 12676   true HanXRQChr04: 143261262-143273937 Helianthus annuus
HanXRQChr04g0117811 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr04: 143272938-143273937 Helianthus annuus
HanXRQChr04g0117811 2.0kb upstream 2.0kb upstream 13676   true HanXRQChr04: 143259262-143272937 Helianthus annuus
HanXRQChr04g0117811 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr04: 143259262-143261261 Helianthus annuus
HanXRQChr04g0117811 2.0kb downstream 2.0kb downstream 13676   true HanXRQChr04: 143261262-143274937 Helianthus annuus
HanXRQChr04g0117811 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr04: 143272938-143274937 Helianthus annuus
HanXRQChr04g0117811 5.0kb upstream 5.0kb upstream 16676   true HanXRQChr04: 143256262-143272937 Helianthus annuus
HanXRQChr04g0117811 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr04: 143256262-143261261 Helianthus annuus
HanXRQChr04g0117811 5.0kb downstream 5.0kb downstream 16676   true HanXRQChr04: 143261262-143277937 Helianthus annuus
HanXRQChr04g0117811 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr04: 143272938-143277937 Helianthus annuus
HanXRQChr04g0117811 10.0kb upstream 10.0kb upstream 21676   true HanXRQChr04: 143251262-143272937 Helianthus annuus
HanXRQChr04g0117811 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr04: 143251262-143261261 Helianthus annuus
HanXRQChr04g0117811 10.0kb downstream 10.0kb downstream 21676   true HanXRQChr04: 143261262-143282937 Helianthus annuus
HanXRQChr04g0117811 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr04: 143272938-143282937 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791917 5273 Angiosperm View MSA
121478325 5263 Asterids View MSA
123749206 5271 Pentapetalae View MSA
122795293 5272 Eudicot View MSA
121063186 5274 Embryophyte View MSA
123102956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain