Gene : HanXRQChr04g0107771 H. annuus r1.2
Defline:  (1 of 58) 1.10.3.9 - Photosystem II Genomic Order:  1242
Name:  ? HanXRQChr04g0107771 Secondary Identifier:  ? PAC:40306654
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PHOTOALL-PWY Helianthus annuus pathologic  
Hannuus PWY-101 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr04g0107771 0.5kb upstream 0.5kb upstream 13486   true HanXRQChr04: 74241339-74254824 Helianthus annuus
HanXRQChr04g0107771 0.5kb upstream 0.5kb upstream 500   false HanXRQChr04: 74254325-74254824 Helianthus annuus
HanXRQChr04g0107771 0.5kb downstream 0.5kb downstream 13486   true HanXRQChr04: 74240839-74254324 Helianthus annuus
HanXRQChr04g0107771 0.5kb downstream 0.5kb downstream 500   false HanXRQChr04: 74240839-74241338 Helianthus annuus
HanXRQChr04g0107771 1.0kb upstream 1.0kb upstream 13986   true HanXRQChr04: 74241339-74255324 Helianthus annuus
HanXRQChr04g0107771 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr04: 74254325-74255324 Helianthus annuus
HanXRQChr04g0107771 1.0kb downstream 1.0kb downstream 13986   true HanXRQChr04: 74240339-74254324 Helianthus annuus
HanXRQChr04g0107771 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr04: 74240339-74241338 Helianthus annuus
HanXRQChr04g0107771 2.0kb upstream 2.0kb upstream 14986   true HanXRQChr04: 74241339-74256324 Helianthus annuus
HanXRQChr04g0107771 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr04: 74254325-74256324 Helianthus annuus
HanXRQChr04g0107771 2.0kb downstream 2.0kb downstream 14986   true HanXRQChr04: 74239339-74254324 Helianthus annuus
HanXRQChr04g0107771 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr04: 74239339-74241338 Helianthus annuus
HanXRQChr04g0107771 5.0kb upstream 5.0kb upstream 17986   true HanXRQChr04: 74241339-74259324 Helianthus annuus
HanXRQChr04g0107771 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr04: 74254325-74259324 Helianthus annuus
HanXRQChr04g0107771 5.0kb downstream 5.0kb downstream 17986   true HanXRQChr04: 74236339-74254324 Helianthus annuus
HanXRQChr04g0107771 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr04: 74236339-74241338 Helianthus annuus
HanXRQChr04g0107771 10.0kb upstream 10.0kb upstream 22986   true HanXRQChr04: 74241339-74264324 Helianthus annuus
HanXRQChr04g0107771 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr04: 74254325-74264324 Helianthus annuus
HanXRQChr04g0107771 10.0kb downstream 10.0kb downstream 22986   true HanXRQChr04: 74231339-74254324 Helianthus annuus
HanXRQChr04g0107771 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr04: 74231339-74241338 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121420683 5263 Asterids Singleton cluster - no MSA
123750687 5271 Pentapetalae View MSA
122795300 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain