Gene : HanXRQChr05g0132711 H. annuus r1.2
Defline:  (1 of 2) K01956 - carbamoyl-phosphate synthase small subunit (carA, CPA1) Genomic Order:  374
Name:  ? HanXRQChr05g0132711 Secondary Identifier:  ? PAC:40312312
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus ARGSYNBSUB-PWY Helianthus annuus pathologic  
Hannuus ARGSYN-PWY Helianthus annuus pathologic  
Hannuus CITRULBIO-PWY Helianthus annuus pathologic  
Hannuus GLUTAMINDEG-PWY Helianthus annuus pathologic  
Hannuus PWY0-162 Helianthus annuus pathologic  
Hannuus PWY-4984 Helianthus annuus pathologic  
Hannuus PWY-5686 Helianthus annuus pathologic  
Hannuus PWY-7211 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr05g0132711 0.5kb upstream 0.5kb upstream 4276   true HanXRQChr05: 19661064-19665339 Helianthus annuus
HanXRQChr05g0132711 0.5kb upstream 0.5kb upstream 500   false HanXRQChr05: 19661064-19661563 Helianthus annuus
HanXRQChr05g0132711 0.5kb downstream 0.5kb downstream 4276   true HanXRQChr05: 19661564-19665839 Helianthus annuus
HanXRQChr05g0132711 0.5kb downstream 0.5kb downstream 500   false HanXRQChr05: 19665340-19665839 Helianthus annuus
HanXRQChr05g0132711 1.0kb upstream 1.0kb upstream 4776   true HanXRQChr05: 19660564-19665339 Helianthus annuus
HanXRQChr05g0132711 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr05: 19660564-19661563 Helianthus annuus
HanXRQChr05g0132711 1.0kb downstream 1.0kb downstream 4776   true HanXRQChr05: 19661564-19666339 Helianthus annuus
HanXRQChr05g0132711 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr05: 19665340-19666339 Helianthus annuus
HanXRQChr05g0132711 2.0kb upstream 2.0kb upstream 5776   true HanXRQChr05: 19659564-19665339 Helianthus annuus
HanXRQChr05g0132711 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr05: 19659564-19661563 Helianthus annuus
HanXRQChr05g0132711 2.0kb downstream 2.0kb downstream 5776   true HanXRQChr05: 19661564-19667339 Helianthus annuus
HanXRQChr05g0132711 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr05: 19665340-19667339 Helianthus annuus
HanXRQChr05g0132711 5.0kb upstream 5.0kb upstream 8776   true HanXRQChr05: 19656564-19665339 Helianthus annuus
HanXRQChr05g0132711 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr05: 19656564-19661563 Helianthus annuus
HanXRQChr05g0132711 5.0kb downstream 5.0kb downstream 8776   true HanXRQChr05: 19661564-19670339 Helianthus annuus
HanXRQChr05g0132711 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr05: 19665340-19670339 Helianthus annuus
HanXRQChr05g0132711 10.0kb upstream 10.0kb upstream 13776   true HanXRQChr05: 19651564-19665339 Helianthus annuus
HanXRQChr05g0132711 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr05: 19651564-19661563 Helianthus annuus
HanXRQChr05g0132711 10.0kb downstream 10.0kb downstream 13776   true HanXRQChr05: 19661564-19675339 Helianthus annuus
HanXRQChr05g0132711 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr05: 19665340-19675339 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480571 5263 Asterids View MSA
123739104 5271 Pentapetalae View MSA
122788005 5272 Eudicot View MSA
122046797 5273 Angiosperm View MSA
121347244 5274 Embryophyte View MSA
123423822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain