Gene : HanXRQChr16g0516961 H. annuus r1.2
Defline:  (1 of 1) PTHR11946:SF7 - LEUCINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  1735
Name:  ? HanXRQChr16g0516961 Secondary Identifier:  ? PAC:40300939
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus TRNA-CHARGING-PWY Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr16g0516961 0.5kb upstream 0.5kb upstream 8369   true HanXRQChr16: 113125622-113133990 Helianthus annuus
HanXRQChr16g0516961 0.5kb upstream 0.5kb upstream 500   false HanXRQChr16: 113125622-113126121 Helianthus annuus
HanXRQChr16g0516961 0.5kb downstream 0.5kb downstream 8369   true HanXRQChr16: 113126122-113134490 Helianthus annuus
HanXRQChr16g0516961 0.5kb downstream 0.5kb downstream 500   false HanXRQChr16: 113133991-113134490 Helianthus annuus
HanXRQChr16g0516961 1.0kb upstream 1.0kb upstream 8869   true HanXRQChr16: 113125122-113133990 Helianthus annuus
HanXRQChr16g0516961 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr16: 113125122-113126121 Helianthus annuus
HanXRQChr16g0516961 1.0kb downstream 1.0kb downstream 8869   true HanXRQChr16: 113126122-113134990 Helianthus annuus
HanXRQChr16g0516961 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr16: 113133991-113134990 Helianthus annuus
HanXRQChr16g0516961 2.0kb upstream 2.0kb upstream 9869   true HanXRQChr16: 113124122-113133990 Helianthus annuus
HanXRQChr16g0516961 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr16: 113124122-113126121 Helianthus annuus
HanXRQChr16g0516961 2.0kb downstream 2.0kb downstream 9869   true HanXRQChr16: 113126122-113135990 Helianthus annuus
HanXRQChr16g0516961 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr16: 113133991-113135990 Helianthus annuus
HanXRQChr16g0516961 5.0kb upstream 5.0kb upstream 12869   true HanXRQChr16: 113121122-113133990 Helianthus annuus
HanXRQChr16g0516961 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr16: 113121122-113126121 Helianthus annuus
HanXRQChr16g0516961 5.0kb downstream 5.0kb downstream 12869   true HanXRQChr16: 113126122-113138990 Helianthus annuus
HanXRQChr16g0516961 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr16: 113133991-113138990 Helianthus annuus
HanXRQChr16g0516961 10.0kb upstream 10.0kb upstream 17869   true HanXRQChr16: 113116122-113133990 Helianthus annuus
HanXRQChr16g0516961 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr16: 113116122-113126121 Helianthus annuus
HanXRQChr16g0516961 10.0kb downstream 10.0kb downstream 17869   true HanXRQChr16: 113126122-113143990 Helianthus annuus
HanXRQChr16g0516961 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr16: 113133991-113143990 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041369 5273 Angiosperm View MSA
121472970 5263 Asterids View MSA
123749958 5271 Pentapetalae View MSA
122789048 5272 Eudicot View MSA
121347479 5274 Embryophyte View MSA
123424257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain