Gene : HanXRQChr06g0170891 H. annuus r1.2
Defline:  (1 of 2) K01899 - succinyl-CoA synthetase alpha subunit (LSC1) Genomic Order:  654
Name:  ? HanXRQChr06g0170891 Secondary Identifier:  ? PAC:40331395
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PWY-5464 Helianthus annuus pathologic  
Hannuus PWY-5690 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr06g0170891 0.5kb upstream 0.5kb upstream 4485   true HanXRQChr06: 18787938-18792422 Helianthus annuus
HanXRQChr06g0170891 0.5kb upstream 0.5kb upstream 500   false HanXRQChr06: 18787938-18788437 Helianthus annuus
HanXRQChr06g0170891 0.5kb downstream 0.5kb downstream 4485   true HanXRQChr06: 18788438-18792922 Helianthus annuus
HanXRQChr06g0170891 0.5kb downstream 0.5kb downstream 500   false HanXRQChr06: 18792423-18792922 Helianthus annuus
HanXRQChr06g0170891 1.0kb upstream 1.0kb upstream 4985   true HanXRQChr06: 18787438-18792422 Helianthus annuus
HanXRQChr06g0170891 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr06: 18787438-18788437 Helianthus annuus
HanXRQChr06g0170891 1.0kb downstream 1.0kb downstream 4985   true HanXRQChr06: 18788438-18793422 Helianthus annuus
HanXRQChr06g0170891 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr06: 18792423-18793422 Helianthus annuus
HanXRQChr06g0170891 2.0kb upstream 2.0kb upstream 5985   true HanXRQChr06: 18786438-18792422 Helianthus annuus
HanXRQChr06g0170891 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr06: 18786438-18788437 Helianthus annuus
HanXRQChr06g0170891 2.0kb downstream 2.0kb downstream 5985   true HanXRQChr06: 18788438-18794422 Helianthus annuus
HanXRQChr06g0170891 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr06: 18792423-18794422 Helianthus annuus
HanXRQChr06g0170891 5.0kb upstream 5.0kb upstream 8985   true HanXRQChr06: 18783438-18792422 Helianthus annuus
HanXRQChr06g0170891 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr06: 18783438-18788437 Helianthus annuus
HanXRQChr06g0170891 5.0kb downstream 5.0kb downstream 8985   true HanXRQChr06: 18788438-18797422 Helianthus annuus
HanXRQChr06g0170891 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr06: 18792423-18797422 Helianthus annuus
HanXRQChr06g0170891 10.0kb upstream 10.0kb upstream 13985   true HanXRQChr06: 18778438-18792422 Helianthus annuus
HanXRQChr06g0170891 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr06: 18778438-18788437 Helianthus annuus
HanXRQChr06g0170891 10.0kb downstream 10.0kb downstream 13985   true HanXRQChr06: 18788438-18802422 Helianthus annuus
HanXRQChr06g0170891 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr06: 18792423-18802422 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469276 5263 Asterids View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain