Gene : HanXRQMTg0579341 H. annuus r1.2
Defline:  (1 of 4) K02256 - cytochrome c oxidase subunit 1 (COX1) Genomic Order:  18
Name:  ? HanXRQMTg0579341 Secondary Identifier:  ? PAC:40320393
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PWY-3781 Helianthus annuus pathologic  
Hannuus PWY-7279 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQMTg0579341 0.5kb upstream 0.5kb upstream 2195   true HanXRQMT: 105639-107833 Helianthus annuus
HanXRQMTg0579341 0.5kb upstream 0.5kb upstream 500   false HanXRQMT: 105639-106138 Helianthus annuus
HanXRQMTg0579341 0.5kb downstream 0.5kb downstream 2195   true HanXRQMT: 106139-108333 Helianthus annuus
HanXRQMTg0579341 0.5kb downstream 0.5kb downstream 500   false HanXRQMT: 107834-108333 Helianthus annuus
HanXRQMTg0579341 1.0kb upstream 1.0kb upstream 2695   true HanXRQMT: 105139-107833 Helianthus annuus
HanXRQMTg0579341 1.0kb upstream 1.0kb upstream 1000   false HanXRQMT: 105139-106138 Helianthus annuus
HanXRQMTg0579341 1.0kb downstream 1.0kb downstream 2695   true HanXRQMT: 106139-108833 Helianthus annuus
HanXRQMTg0579341 1.0kb downstream 1.0kb downstream 1000   false HanXRQMT: 107834-108833 Helianthus annuus
HanXRQMTg0579341 2.0kb upstream 2.0kb upstream 3695   true HanXRQMT: 104139-107833 Helianthus annuus
HanXRQMTg0579341 2.0kb upstream 2.0kb upstream 2000   false HanXRQMT: 104139-106138 Helianthus annuus
HanXRQMTg0579341 2.0kb downstream 2.0kb downstream 3695   true HanXRQMT: 106139-109833 Helianthus annuus
HanXRQMTg0579341 2.0kb downstream 2.0kb downstream 2000   false HanXRQMT: 107834-109833 Helianthus annuus
HanXRQMTg0579341 5.0kb upstream 5.0kb upstream 6695   true HanXRQMT: 101139-107833 Helianthus annuus
HanXRQMTg0579341 5.0kb upstream 5.0kb upstream 5000   false HanXRQMT: 101139-106138 Helianthus annuus
HanXRQMTg0579341 5.0kb downstream 5.0kb downstream 6695   true HanXRQMT: 106139-112833 Helianthus annuus
HanXRQMTg0579341 5.0kb downstream 5.0kb downstream 5000   false HanXRQMT: 107834-112833 Helianthus annuus
HanXRQMTg0579341 10.0kb upstream 10.0kb upstream 11695   true HanXRQMT: 96139-107833 Helianthus annuus
HanXRQMTg0579341 10.0kb upstream 10.0kb upstream 10000   false HanXRQMT: 96139-106138 Helianthus annuus
HanXRQMTg0579341 10.0kb downstream 10.0kb downstream 11695   true HanXRQMT: 106139-117833 Helianthus annuus
HanXRQMTg0579341 10.0kb downstream 10.0kb downstream 10000   false HanXRQMT: 107834-117833 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026781 5273 Angiosperm View MSA
121480986 5263 Asterids View MSA
123750940 5271 Pentapetalae View MSA
122794080 5272 Eudicot View MSA
121348518 5274 Embryophyte View MSA
123380893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain