Gene : HanXRQCPg0580121 H. annuus r1.2
Defline:  (1 of 9) K02704 - photosystem II CP47 chlorophyll apoprotein (psbB) Genomic Order:  27
Name:  ? HanXRQCPg0580121 Secondary Identifier:  ? PAC:40330125
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PHOTOALL-PWY Helianthus annuus pathologic  
Hannuus PWY-101 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQCPg0580121 0.5kb upstream 0.5kb upstream 2027   true HanXRQCP: 71277-73303 Helianthus annuus
HanXRQCPg0580121 0.5kb upstream 0.5kb upstream 500   false HanXRQCP: 71277-71776 Helianthus annuus
HanXRQCPg0580121 0.5kb downstream 0.5kb downstream 2027   true HanXRQCP: 71777-73803 Helianthus annuus
HanXRQCPg0580121 0.5kb downstream 0.5kb downstream 500   false HanXRQCP: 73304-73803 Helianthus annuus
HanXRQCPg0580121 1.0kb upstream 1.0kb upstream 2527   true HanXRQCP: 70777-73303 Helianthus annuus
HanXRQCPg0580121 1.0kb upstream 1.0kb upstream 1000   false HanXRQCP: 70777-71776 Helianthus annuus
HanXRQCPg0580121 1.0kb downstream 1.0kb downstream 2527   true HanXRQCP: 71777-74303 Helianthus annuus
HanXRQCPg0580121 1.0kb downstream 1.0kb downstream 1000   false HanXRQCP: 73304-74303 Helianthus annuus
HanXRQCPg0580121 2.0kb upstream 2.0kb upstream 3527   true HanXRQCP: 69777-73303 Helianthus annuus
HanXRQCPg0580121 2.0kb upstream 2.0kb upstream 2000   false HanXRQCP: 69777-71776 Helianthus annuus
HanXRQCPg0580121 2.0kb downstream 2.0kb downstream 3527   true HanXRQCP: 71777-75303 Helianthus annuus
HanXRQCPg0580121 2.0kb downstream 2.0kb downstream 2000   false HanXRQCP: 73304-75303 Helianthus annuus
HanXRQCPg0580121 5.0kb upstream 5.0kb upstream 6527   true HanXRQCP: 66777-73303 Helianthus annuus
HanXRQCPg0580121 5.0kb upstream 5.0kb upstream 5000   false HanXRQCP: 66777-71776 Helianthus annuus
HanXRQCPg0580121 5.0kb downstream 5.0kb downstream 6527   true HanXRQCP: 71777-78303 Helianthus annuus
HanXRQCPg0580121 5.0kb downstream 5.0kb downstream 5000   false HanXRQCP: 73304-78303 Helianthus annuus
HanXRQCPg0580121 10.0kb upstream 10.0kb upstream 11527   true HanXRQCP: 61777-73303 Helianthus annuus
HanXRQCPg0580121 10.0kb upstream 10.0kb upstream 10000   false HanXRQCP: 61777-71776 Helianthus annuus
HanXRQCPg0580121 10.0kb downstream 10.0kb downstream 11527   true HanXRQCP: 71777-83303 Helianthus annuus
HanXRQCPg0580121 10.0kb downstream 10.0kb downstream 10000   false HanXRQCP: 73304-83303 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481691 5263 Asterids View MSA
123753691 5271 Pentapetalae View MSA
122787525 5272 Eudicot View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain