Gene : HanXRQChr13g0417841 H. annuus r1.2
Defline:  (1 of 2) K01704 - 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit (leuD) Genomic Order:  2843
Name:  ? HanXRQChr13g0417841 Secondary Identifier:  ? PAC:40314079
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus BRANCHED-CHAIN-AA-SYN-PWY Helianthus annuus pathologic  
Hannuus LEUSYN-PWY Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr13g0417841 0.5kb upstream 0.5kb upstream 2574   true HanXRQChr13: 166265650-166268223 Helianthus annuus
HanXRQChr13g0417841 0.5kb upstream 0.5kb upstream 500   false HanXRQChr13: 166267724-166268223 Helianthus annuus
HanXRQChr13g0417841 0.5kb downstream 0.5kb downstream 2574   true HanXRQChr13: 166265150-166267723 Helianthus annuus
HanXRQChr13g0417841 0.5kb downstream 0.5kb downstream 500   false HanXRQChr13: 166265150-166265649 Helianthus annuus
HanXRQChr13g0417841 1.0kb upstream 1.0kb upstream 3074   true HanXRQChr13: 166265650-166268723 Helianthus annuus
HanXRQChr13g0417841 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr13: 166267724-166268723 Helianthus annuus
HanXRQChr13g0417841 1.0kb downstream 1.0kb downstream 3074   true HanXRQChr13: 166264650-166267723 Helianthus annuus
HanXRQChr13g0417841 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr13: 166264650-166265649 Helianthus annuus
HanXRQChr13g0417841 2.0kb upstream 2.0kb upstream 4074   true HanXRQChr13: 166265650-166269723 Helianthus annuus
HanXRQChr13g0417841 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr13: 166267724-166269723 Helianthus annuus
HanXRQChr13g0417841 2.0kb downstream 2.0kb downstream 4074   true HanXRQChr13: 166263650-166267723 Helianthus annuus
HanXRQChr13g0417841 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr13: 166263650-166265649 Helianthus annuus
HanXRQChr13g0417841 5.0kb upstream 5.0kb upstream 7074   true HanXRQChr13: 166265650-166272723 Helianthus annuus
HanXRQChr13g0417841 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr13: 166267724-166272723 Helianthus annuus
HanXRQChr13g0417841 5.0kb downstream 5.0kb downstream 7074   true HanXRQChr13: 166260650-166267723 Helianthus annuus
HanXRQChr13g0417841 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr13: 166260650-166265649 Helianthus annuus
HanXRQChr13g0417841 10.0kb upstream 10.0kb upstream 12074   true HanXRQChr13: 166265650-166277723 Helianthus annuus
HanXRQChr13g0417841 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr13: 166267724-166277723 Helianthus annuus
HanXRQChr13g0417841 10.0kb downstream 10.0kb downstream 12074   true HanXRQChr13: 166255650-166267723 Helianthus annuus
HanXRQChr13g0417841 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr13: 166255650-166265649 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040980 5273 Angiosperm View MSA
121475512 5263 Asterids View MSA
123736502 5271 Pentapetalae View MSA
122789957 5272 Eudicot View MSA
121345878 5274 Embryophyte View MSA
123423763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain