Gene : HanXRQChr13g0410851 H. annuus r1.2
Defline:  (1 of 3) PTHR21089//PTHR21089:SF12 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  2215
Name:  ? HanXRQChr13g0410851 Secondary Identifier:  ? PAC:40315584
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus ARO-PWY Helianthus annuus pathologic  
Hannuus PWY-6163 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr13g0410851 0.5kb upstream 0.5kb upstream 5147   true HanXRQChr13: 137043650-137048796 Helianthus annuus
HanXRQChr13g0410851 0.5kb upstream 0.5kb upstream 500   false HanXRQChr13: 137048297-137048796 Helianthus annuus
HanXRQChr13g0410851 0.5kb downstream 0.5kb downstream 5147   true HanXRQChr13: 137043150-137048296 Helianthus annuus
HanXRQChr13g0410851 0.5kb downstream 0.5kb downstream 500   false HanXRQChr13: 137043150-137043649 Helianthus annuus
HanXRQChr13g0410851 1.0kb upstream 1.0kb upstream 5647   true HanXRQChr13: 137043650-137049296 Helianthus annuus
HanXRQChr13g0410851 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr13: 137048297-137049296 Helianthus annuus
HanXRQChr13g0410851 1.0kb downstream 1.0kb downstream 5647   true HanXRQChr13: 137042650-137048296 Helianthus annuus
HanXRQChr13g0410851 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr13: 137042650-137043649 Helianthus annuus
HanXRQChr13g0410851 2.0kb upstream 2.0kb upstream 6647   true HanXRQChr13: 137043650-137050296 Helianthus annuus
HanXRQChr13g0410851 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr13: 137048297-137050296 Helianthus annuus
HanXRQChr13g0410851 2.0kb downstream 2.0kb downstream 6647   true HanXRQChr13: 137041650-137048296 Helianthus annuus
HanXRQChr13g0410851 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr13: 137041650-137043649 Helianthus annuus
HanXRQChr13g0410851 5.0kb upstream 5.0kb upstream 9647   true HanXRQChr13: 137043650-137053296 Helianthus annuus
HanXRQChr13g0410851 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr13: 137048297-137053296 Helianthus annuus
HanXRQChr13g0410851 5.0kb downstream 5.0kb downstream 9647   true HanXRQChr13: 137038650-137048296 Helianthus annuus
HanXRQChr13g0410851 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr13: 137038650-137043649 Helianthus annuus
HanXRQChr13g0410851 10.0kb upstream 10.0kb upstream 14647   true HanXRQChr13: 137043650-137058296 Helianthus annuus
HanXRQChr13g0410851 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr13: 137048297-137058296 Helianthus annuus
HanXRQChr13g0410851 10.0kb downstream 10.0kb downstream 14647   true HanXRQChr13: 137033650-137048296 Helianthus annuus
HanXRQChr13g0410851 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr13: 137033650-137043649 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468327 5263 Asterids View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain