Gene : HanXRQChr09g0272941 H. annuus r1.2
Defline:  (1 of 11) K00134 - glyceraldehyde 3-phosphate dehydrogenase (GAPDH, gapA) Genomic Order:  3191
Name:  ? HanXRQChr09g0272941 Secondary Identifier:  ? PAC:40310442
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus ANAEROFRUCAT-PWY Helianthus annuus pathologic  
Hannuus ANAGLYCOLYSIS-PWY Helianthus annuus pathologic  
Hannuus GLUCONEO-PWY Helianthus annuus pathologic  
Hannuus PWY-1042 Helianthus annuus pathologic  
Hannuus PWY-5464 Helianthus annuus pathologic  
Hannuus PWY66-399 Helianthus annuus pathologic  
Hannuus SUCSYN-PWY Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr09g0272941 0.5kb upstream 0.5kb upstream 3660   true HanXRQChr09: 198928499-198932158 Helianthus annuus
HanXRQChr09g0272941 0.5kb upstream 0.5kb upstream 500   false HanXRQChr09: 198928499-198928998 Helianthus annuus
HanXRQChr09g0272941 0.5kb downstream 0.5kb downstream 3660   true HanXRQChr09: 198928999-198932658 Helianthus annuus
HanXRQChr09g0272941 0.5kb downstream 0.5kb downstream 500   false HanXRQChr09: 198932159-198932658 Helianthus annuus
HanXRQChr09g0272941 1.0kb upstream 1.0kb upstream 4160   true HanXRQChr09: 198927999-198932158 Helianthus annuus
HanXRQChr09g0272941 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr09: 198927999-198928998 Helianthus annuus
HanXRQChr09g0272941 1.0kb downstream 1.0kb downstream 4160   true HanXRQChr09: 198928999-198933158 Helianthus annuus
HanXRQChr09g0272941 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr09: 198932159-198933158 Helianthus annuus
HanXRQChr09g0272941 2.0kb upstream 2.0kb upstream 5160   true HanXRQChr09: 198926999-198932158 Helianthus annuus
HanXRQChr09g0272941 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr09: 198926999-198928998 Helianthus annuus
HanXRQChr09g0272941 2.0kb downstream 2.0kb downstream 5160   true HanXRQChr09: 198928999-198934158 Helianthus annuus
HanXRQChr09g0272941 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr09: 198932159-198934158 Helianthus annuus
HanXRQChr09g0272941 5.0kb upstream 5.0kb upstream 8160   true HanXRQChr09: 198923999-198932158 Helianthus annuus
HanXRQChr09g0272941 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr09: 198923999-198928998 Helianthus annuus
HanXRQChr09g0272941 5.0kb downstream 5.0kb downstream 8160   true HanXRQChr09: 198928999-198937158 Helianthus annuus
HanXRQChr09g0272941 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr09: 198932159-198937158 Helianthus annuus
HanXRQChr09g0272941 10.0kb upstream 10.0kb upstream 13160   true HanXRQChr09: 198918999-198932158 Helianthus annuus
HanXRQChr09g0272941 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr09: 198918999-198928998 Helianthus annuus
HanXRQChr09g0272941 10.0kb downstream 10.0kb downstream 13160   true HanXRQChr09: 198928999-198942158 Helianthus annuus
HanXRQChr09g0272941 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr09: 198932159-198942158 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478699 5263 Asterids View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain