Gene : HanXRQChr13g0386841 H. annuus r1.2
Defline:  (1 of 3) K01647 - citrate synthase (CS, gltA) Genomic Order:  39
Name:  ? HanXRQChr13g0386841 Secondary Identifier:  ? PAC:40316391
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus GLYOXYLATE-BYPASS Helianthus annuus pathologic  
Hannuus PWY-5464 Helianthus annuus pathologic  
Hannuus PWY-561 Helianthus annuus pathologic  
Hannuus PWY-5690 Helianthus annuus pathologic  
Hannuus PWY-6549 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr13g0386841 0.5kb upstream 0.5kb upstream 7628   true HanXRQChr13: 2000787-2008414 Helianthus annuus
HanXRQChr13g0386841 0.5kb upstream 0.5kb upstream 500   false HanXRQChr13: 2000787-2001286 Helianthus annuus
HanXRQChr13g0386841 0.5kb downstream 0.5kb downstream 7628   true HanXRQChr13: 2001287-2008914 Helianthus annuus
HanXRQChr13g0386841 0.5kb downstream 0.5kb downstream 500   false HanXRQChr13: 2008415-2008914 Helianthus annuus
HanXRQChr13g0386841 1.0kb upstream 1.0kb upstream 8128   true HanXRQChr13: 2000287-2008414 Helianthus annuus
HanXRQChr13g0386841 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr13: 2000287-2001286 Helianthus annuus
HanXRQChr13g0386841 1.0kb downstream 1.0kb downstream 8128   true HanXRQChr13: 2001287-2009414 Helianthus annuus
HanXRQChr13g0386841 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr13: 2008415-2009414 Helianthus annuus
HanXRQChr13g0386841 2.0kb upstream 2.0kb upstream 9128   true HanXRQChr13: 1999287-2008414 Helianthus annuus
HanXRQChr13g0386841 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr13: 1999287-2001286 Helianthus annuus
HanXRQChr13g0386841 2.0kb downstream 2.0kb downstream 9128   true HanXRQChr13: 2001287-2010414 Helianthus annuus
HanXRQChr13g0386841 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr13: 2008415-2010414 Helianthus annuus
HanXRQChr13g0386841 5.0kb upstream 5.0kb upstream 12128   true HanXRQChr13: 1996287-2008414 Helianthus annuus
HanXRQChr13g0386841 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr13: 1996287-2001286 Helianthus annuus
HanXRQChr13g0386841 5.0kb downstream 5.0kb downstream 12128   true HanXRQChr13: 2001287-2013414 Helianthus annuus
HanXRQChr13g0386841 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr13: 2008415-2013414 Helianthus annuus
HanXRQChr13g0386841 10.0kb upstream 10.0kb upstream 17128   true HanXRQChr13: 1991287-2008414 Helianthus annuus
HanXRQChr13g0386841 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr13: 1991287-2001286 Helianthus annuus
HanXRQChr13g0386841 10.0kb downstream 10.0kb downstream 17128   true HanXRQChr13: 2001287-2018414 Helianthus annuus
HanXRQChr13g0386841 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr13: 2008415-2018414 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475447 5263 Asterids View MSA
123748183 5271 Pentapetalae View MSA
122794190 5272 Eudicot View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain