Gene : HanXRQChr08g0236571 H. annuus r1.2
Defline:  (1 of 2) PTHR10617:SF116 - GERANYLGERANYL DIPHOSPHATE REDUCTASE, CHLOROPLASTIC Genomic Order:  2660
Name:  ? HanXRQChr08g0236571 Secondary Identifier:  ? PAC:40345707
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PWY-5063 Helianthus annuus pathologic  
Hannuus PWY-5064 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr08g0236571 0.5kb upstream 0.5kb upstream 1886   true HanXRQChr08: 148327411-148329296 Helianthus annuus
HanXRQChr08g0236571 0.5kb upstream 0.5kb upstream 500   false HanXRQChr08: 148328797-148329296 Helianthus annuus
HanXRQChr08g0236571 0.5kb downstream 0.5kb downstream 1886   true HanXRQChr08: 148326911-148328796 Helianthus annuus
HanXRQChr08g0236571 0.5kb downstream 0.5kb downstream 500   false HanXRQChr08: 148326911-148327410 Helianthus annuus
HanXRQChr08g0236571 1.0kb upstream 1.0kb upstream 2386   true HanXRQChr08: 148327411-148329796 Helianthus annuus
HanXRQChr08g0236571 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr08: 148328797-148329796 Helianthus annuus
HanXRQChr08g0236571 1.0kb downstream 1.0kb downstream 2386   true HanXRQChr08: 148326411-148328796 Helianthus annuus
HanXRQChr08g0236571 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr08: 148326411-148327410 Helianthus annuus
HanXRQChr08g0236571 2.0kb upstream 2.0kb upstream 3386   true HanXRQChr08: 148327411-148330796 Helianthus annuus
HanXRQChr08g0236571 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr08: 148328797-148330796 Helianthus annuus
HanXRQChr08g0236571 2.0kb downstream 2.0kb downstream 3386   true HanXRQChr08: 148325411-148328796 Helianthus annuus
HanXRQChr08g0236571 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr08: 148325411-148327410 Helianthus annuus
HanXRQChr08g0236571 5.0kb upstream 5.0kb upstream 6386   true HanXRQChr08: 148327411-148333796 Helianthus annuus
HanXRQChr08g0236571 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr08: 148328797-148333796 Helianthus annuus
HanXRQChr08g0236571 5.0kb downstream 5.0kb downstream 6386   true HanXRQChr08: 148322411-148328796 Helianthus annuus
HanXRQChr08g0236571 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr08: 148322411-148327410 Helianthus annuus
HanXRQChr08g0236571 10.0kb upstream 10.0kb upstream 11386   true HanXRQChr08: 148327411-148338796 Helianthus annuus
HanXRQChr08g0236571 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr08: 148328797-148338796 Helianthus annuus
HanXRQChr08g0236571 10.0kb downstream 10.0kb downstream 11386   true HanXRQChr08: 148317411-148328796 Helianthus annuus
HanXRQChr08g0236571 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr08: 148317411-148327410 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470417 5263 Asterids View MSA
123742493 5271 Pentapetalae View MSA
122794040 5272 Eudicot View MSA
122041542 5273 Angiosperm View MSA
121345615 5274 Embryophyte View MSA
123424772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain