Gene : HanXRQChr13g0393111 H. annuus r1.2
Defline:  (1 of 3) K00797 - spermidine synthase (speE, SRM) Genomic Order:  593
Name:  ? HanXRQChr13g0393111 Secondary Identifier:  ? PAC:40314643
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus BSUBPOLYAMSYN-PWY Helianthus annuus pathologic  
Hannuus PWY-7528 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr13g0393111 0.5kb upstream 0.5kb upstream 5852   true HanXRQChr13: 43400743-43406594 Helianthus annuus
HanXRQChr13g0393111 0.5kb upstream 0.5kb upstream 500   false HanXRQChr13: 43400743-43401242 Helianthus annuus
HanXRQChr13g0393111 0.5kb downstream 0.5kb downstream 5852   true HanXRQChr13: 43401243-43407094 Helianthus annuus
HanXRQChr13g0393111 0.5kb downstream 0.5kb downstream 500   false HanXRQChr13: 43406595-43407094 Helianthus annuus
HanXRQChr13g0393111 1.0kb upstream 1.0kb upstream 6352   true HanXRQChr13: 43400243-43406594 Helianthus annuus
HanXRQChr13g0393111 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr13: 43400243-43401242 Helianthus annuus
HanXRQChr13g0393111 1.0kb downstream 1.0kb downstream 6352   true HanXRQChr13: 43401243-43407594 Helianthus annuus
HanXRQChr13g0393111 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr13: 43406595-43407594 Helianthus annuus
HanXRQChr13g0393111 2.0kb upstream 2.0kb upstream 7352   true HanXRQChr13: 43399243-43406594 Helianthus annuus
HanXRQChr13g0393111 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr13: 43399243-43401242 Helianthus annuus
HanXRQChr13g0393111 2.0kb downstream 2.0kb downstream 7352   true HanXRQChr13: 43401243-43408594 Helianthus annuus
HanXRQChr13g0393111 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr13: 43406595-43408594 Helianthus annuus
HanXRQChr13g0393111 5.0kb upstream 5.0kb upstream 10352   true HanXRQChr13: 43396243-43406594 Helianthus annuus
HanXRQChr13g0393111 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr13: 43396243-43401242 Helianthus annuus
HanXRQChr13g0393111 5.0kb downstream 5.0kb downstream 10352   true HanXRQChr13: 43401243-43411594 Helianthus annuus
HanXRQChr13g0393111 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr13: 43406595-43411594 Helianthus annuus
HanXRQChr13g0393111 10.0kb upstream 10.0kb upstream 15352   true HanXRQChr13: 43391243-43406594 Helianthus annuus
HanXRQChr13g0393111 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr13: 43391243-43401242 Helianthus annuus
HanXRQChr13g0393111 10.0kb downstream 10.0kb downstream 15352   true HanXRQChr13: 43401243-43416594 Helianthus annuus
HanXRQChr13g0393111 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr13: 43406595-43416594 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473129 5263 Asterids View MSA
123739892 5271 Pentapetalae View MSA
122785821 5272 Eudicot View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain