Gene : HanXRQChr09g0249701 H. annuus r1.2
Defline:  (1 of 2) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  1074
Name:  ? HanXRQChr09g0249701 Secondary Identifier:  ? PAC:40307776
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus ARO-PWY Helianthus annuus pathologic  
Hannuus PWY-6163 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr09g0249701 0.5kb upstream 0.5kb upstream 9095   true HanXRQChr09: 91204706-91213800 Helianthus annuus
HanXRQChr09g0249701 0.5kb upstream 0.5kb upstream 500   false HanXRQChr09: 91213301-91213800 Helianthus annuus
HanXRQChr09g0249701 0.5kb downstream 0.5kb downstream 9095   true HanXRQChr09: 91204206-91213300 Helianthus annuus
HanXRQChr09g0249701 0.5kb downstream 0.5kb downstream 500   false HanXRQChr09: 91204206-91204705 Helianthus annuus
HanXRQChr09g0249701 1.0kb upstream 1.0kb upstream 9595   true HanXRQChr09: 91204706-91214300 Helianthus annuus
HanXRQChr09g0249701 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr09: 91213301-91214300 Helianthus annuus
HanXRQChr09g0249701 1.0kb downstream 1.0kb downstream 9595   true HanXRQChr09: 91203706-91213300 Helianthus annuus
HanXRQChr09g0249701 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr09: 91203706-91204705 Helianthus annuus
HanXRQChr09g0249701 2.0kb upstream 2.0kb upstream 10595   true HanXRQChr09: 91204706-91215300 Helianthus annuus
HanXRQChr09g0249701 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr09: 91213301-91215300 Helianthus annuus
HanXRQChr09g0249701 2.0kb downstream 2.0kb downstream 10595   true HanXRQChr09: 91202706-91213300 Helianthus annuus
HanXRQChr09g0249701 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr09: 91202706-91204705 Helianthus annuus
HanXRQChr09g0249701 5.0kb upstream 5.0kb upstream 13595   true HanXRQChr09: 91204706-91218300 Helianthus annuus
HanXRQChr09g0249701 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr09: 91213301-91218300 Helianthus annuus
HanXRQChr09g0249701 5.0kb downstream 5.0kb downstream 13595   true HanXRQChr09: 91199706-91213300 Helianthus annuus
HanXRQChr09g0249701 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr09: 91199706-91204705 Helianthus annuus
HanXRQChr09g0249701 10.0kb upstream 10.0kb upstream 18595   true HanXRQChr09: 91204706-91223300 Helianthus annuus
HanXRQChr09g0249701 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr09: 91213301-91223300 Helianthus annuus
HanXRQChr09g0249701 10.0kb downstream 10.0kb downstream 18595   true HanXRQChr09: 91194706-91213300 Helianthus annuus
HanXRQChr09g0249701 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr09: 91194706-91204705 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
121475798 5263 Asterids View MSA
123747909 5271 Pentapetalae View MSA
122787011 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain