Gene : HanXRQChr09g0260001 H. annuus r1.2
Defline:  (1 of 1) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) Genomic Order:  2009
Name:  ? HanXRQChr09g0260001 Secondary Identifier:  ? PAC:40308120
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus CAROTENOID-PWY Helianthus annuus pathologic  
Hannuus PWY-5943 Helianthus annuus pathologic  
Hannuus PWY-5947 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr09g0260001 0.5kb upstream 0.5kb upstream 2399   true HanXRQChr09: 150622934-150625332 Helianthus annuus
HanXRQChr09g0260001 0.5kb upstream 0.5kb upstream 500   false HanXRQChr09: 150624833-150625332 Helianthus annuus
HanXRQChr09g0260001 0.5kb downstream 0.5kb downstream 2399   true HanXRQChr09: 150622434-150624832 Helianthus annuus
HanXRQChr09g0260001 0.5kb downstream 0.5kb downstream 500   false HanXRQChr09: 150622434-150622933 Helianthus annuus
HanXRQChr09g0260001 1.0kb upstream 1.0kb upstream 2899   true HanXRQChr09: 150622934-150625832 Helianthus annuus
HanXRQChr09g0260001 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr09: 150624833-150625832 Helianthus annuus
HanXRQChr09g0260001 1.0kb downstream 1.0kb downstream 2899   true HanXRQChr09: 150621934-150624832 Helianthus annuus
HanXRQChr09g0260001 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr09: 150621934-150622933 Helianthus annuus
HanXRQChr09g0260001 2.0kb upstream 2.0kb upstream 3899   true HanXRQChr09: 150622934-150626832 Helianthus annuus
HanXRQChr09g0260001 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr09: 150624833-150626832 Helianthus annuus
HanXRQChr09g0260001 2.0kb downstream 2.0kb downstream 3899   true HanXRQChr09: 150620934-150624832 Helianthus annuus
HanXRQChr09g0260001 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr09: 150620934-150622933 Helianthus annuus
HanXRQChr09g0260001 5.0kb upstream 5.0kb upstream 6899   true HanXRQChr09: 150622934-150629832 Helianthus annuus
HanXRQChr09g0260001 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr09: 150624833-150629832 Helianthus annuus
HanXRQChr09g0260001 5.0kb downstream 5.0kb downstream 6899   true HanXRQChr09: 150617934-150624832 Helianthus annuus
HanXRQChr09g0260001 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr09: 150617934-150622933 Helianthus annuus
HanXRQChr09g0260001 10.0kb upstream 10.0kb upstream 11899   true HanXRQChr09: 150622934-150634832 Helianthus annuus
HanXRQChr09g0260001 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr09: 150624833-150634832 Helianthus annuus
HanXRQChr09g0260001 10.0kb downstream 10.0kb downstream 11899   true HanXRQChr09: 150612934-150624832 Helianthus annuus
HanXRQChr09g0260001 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr09: 150612934-150622933 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471743 5263 Asterids View MSA
123737595 5271 Pentapetalae View MSA
122786885 5272 Eudicot View MSA
122046204 5273 Angiosperm View MSA
121345644 5274 Embryophyte View MSA
123423874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain