Gene : HanXRQChr12g0365671 H. annuus r1.2
Defline:  (1 of 3) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  1065
Name:  ? HanXRQChr12g0365671 Secondary Identifier:  ? PAC:40320040
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus CAROTENOID-PWY Helianthus annuus pathologic  
Hannuus PWY-6475 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr12g0365671 0.5kb upstream 0.5kb upstream 5267   true HanXRQChr12: 39201022-39206288 Helianthus annuus
HanXRQChr12g0365671 0.5kb upstream 0.5kb upstream 500   false HanXRQChr12: 39205789-39206288 Helianthus annuus
HanXRQChr12g0365671 0.5kb downstream 0.5kb downstream 5267   true HanXRQChr12: 39200522-39205788 Helianthus annuus
HanXRQChr12g0365671 0.5kb downstream 0.5kb downstream 500   false HanXRQChr12: 39200522-39201021 Helianthus annuus
HanXRQChr12g0365671 1.0kb upstream 1.0kb upstream 5767   true HanXRQChr12: 39201022-39206788 Helianthus annuus
HanXRQChr12g0365671 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr12: 39205789-39206788 Helianthus annuus
HanXRQChr12g0365671 1.0kb downstream 1.0kb downstream 5767   true HanXRQChr12: 39200022-39205788 Helianthus annuus
HanXRQChr12g0365671 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr12: 39200022-39201021 Helianthus annuus
HanXRQChr12g0365671 2.0kb upstream 2.0kb upstream 6767   true HanXRQChr12: 39201022-39207788 Helianthus annuus
HanXRQChr12g0365671 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr12: 39205789-39207788 Helianthus annuus
HanXRQChr12g0365671 2.0kb downstream 2.0kb downstream 6767   true HanXRQChr12: 39199022-39205788 Helianthus annuus
HanXRQChr12g0365671 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr12: 39199022-39201021 Helianthus annuus
HanXRQChr12g0365671 5.0kb upstream 5.0kb upstream 9767   true HanXRQChr12: 39201022-39210788 Helianthus annuus
HanXRQChr12g0365671 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr12: 39205789-39210788 Helianthus annuus
HanXRQChr12g0365671 5.0kb downstream 5.0kb downstream 9767   true HanXRQChr12: 39196022-39205788 Helianthus annuus
HanXRQChr12g0365671 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr12: 39196022-39201021 Helianthus annuus
HanXRQChr12g0365671 10.0kb upstream 10.0kb upstream 14767   true HanXRQChr12: 39201022-39215788 Helianthus annuus
HanXRQChr12g0365671 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr12: 39205789-39215788 Helianthus annuus
HanXRQChr12g0365671 10.0kb downstream 10.0kb downstream 14767   true HanXRQChr12: 39191022-39205788 Helianthus annuus
HanXRQChr12g0365671 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr12: 39191022-39201021 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
121480791 5263 Asterids View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain