Gene : HanXRQChr12g0367491 H. annuus r1.2
Defline:  (1 of 3) K01647 - citrate synthase (CS, gltA) Genomic Order:  1226
Name:  ? HanXRQChr12g0367491 Secondary Identifier:  ? PAC:40317545
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus GLYOXYLATE-BYPASS Helianthus annuus pathologic  
Hannuus PWY-5464 Helianthus annuus pathologic  
Hannuus PWY-561 Helianthus annuus pathologic  
Hannuus PWY-5690 Helianthus annuus pathologic  
Hannuus PWY-6549 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr12g0367491 0.5kb upstream 0.5kb upstream 7888   true HanXRQChr12: 46641954-46649841 Helianthus annuus
HanXRQChr12g0367491 0.5kb upstream 0.5kb upstream 500   false HanXRQChr12: 46641954-46642453 Helianthus annuus
HanXRQChr12g0367491 0.5kb downstream 0.5kb downstream 7888   true HanXRQChr12: 46642454-46650341 Helianthus annuus
HanXRQChr12g0367491 0.5kb downstream 0.5kb downstream 500   false HanXRQChr12: 46649842-46650341 Helianthus annuus
HanXRQChr12g0367491 1.0kb upstream 1.0kb upstream 8388   true HanXRQChr12: 46641454-46649841 Helianthus annuus
HanXRQChr12g0367491 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr12: 46641454-46642453 Helianthus annuus
HanXRQChr12g0367491 1.0kb downstream 1.0kb downstream 8388   true HanXRQChr12: 46642454-46650841 Helianthus annuus
HanXRQChr12g0367491 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr12: 46649842-46650841 Helianthus annuus
HanXRQChr12g0367491 2.0kb upstream 2.0kb upstream 9388   true HanXRQChr12: 46640454-46649841 Helianthus annuus
HanXRQChr12g0367491 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr12: 46640454-46642453 Helianthus annuus
HanXRQChr12g0367491 2.0kb downstream 2.0kb downstream 9388   true HanXRQChr12: 46642454-46651841 Helianthus annuus
HanXRQChr12g0367491 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr12: 46649842-46651841 Helianthus annuus
HanXRQChr12g0367491 5.0kb upstream 5.0kb upstream 12388   true HanXRQChr12: 46637454-46649841 Helianthus annuus
HanXRQChr12g0367491 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr12: 46637454-46642453 Helianthus annuus
HanXRQChr12g0367491 5.0kb downstream 5.0kb downstream 12388   true HanXRQChr12: 46642454-46654841 Helianthus annuus
HanXRQChr12g0367491 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr12: 46649842-46654841 Helianthus annuus
HanXRQChr12g0367491 10.0kb upstream 10.0kb upstream 17388   true HanXRQChr12: 46632454-46649841 Helianthus annuus
HanXRQChr12g0367491 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr12: 46632454-46642453 Helianthus annuus
HanXRQChr12g0367491 10.0kb downstream 10.0kb downstream 17388   true HanXRQChr12: 46642454-46659841 Helianthus annuus
HanXRQChr12g0367491 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr12: 46649842-46659841 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475447 5263 Asterids View MSA
123748183 5271 Pentapetalae View MSA
122794190 5272 Eudicot View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain